Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SMC6	Gene	0	40.21	11.39	43.18	18.22	192.74	13.49	43.58
2	402989	Transcript	0	0.47	0.00	0.55	0.22	1.65	0.11	0.35
3	381272	Transcript	0	3.68	0.01	4.17	1.05	11.54	1.98	7.22
4	351948	Transcript	0	8.40	3.40	9.75	8.50	52.63	3.92	8.17
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	0	0.01	0.00	0.00	0.03	0.00	0.00	0.02
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER4a	ExonRegion	0	3.75	0.00	4.42	1.69	13.18	0.87	2.80
12	E4_Da	NovelBoundary	0	64.61	25.25	43.70	30.99	93.41	28.33	29.84
13	E4a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	I4_AR2	ActiveIntronRegion	0	7.74	1.00	13.60	1.05	6.72	0.85	7.32
15	Ix	Intron	0	21.22	1.49	53.91	0.88	17.32	1.39	20.65
16	Ix_AR4	ActiveIntronRegion	0	28.05	1.61	69.94	1.11	25.73	1.90	23.87
17	Ix_AR3	ActiveIntronRegion	0	24.52	0.61	56.97	0.64	20.58	0.63	21.74
18	Ix_SR2	SilentIntronRegion	0	12.74	1.54	44.37	0.86	11.09	0.99	18.28
19	Ix_AR2	ActiveIntronRegion	0	17.47	0.85	42.13	0.50	12.24	0.64	14.67
20	Ix_AR1	ActiveIntronRegion	0	21.76	1.91	53.54	0.94	15.98	1.63	21.93
21	ER5a	ExonRegion	0	0.21	0.00	0.68	0.00	0.88	0.00	1.35
22	ER5b	ExonRegion	0	2.85	0.97	4.08	5.41	17.73	3.21	3.52
23	E5_Da	NovelBoundary	0	6.66	1.63	13.91	1.44	0.00	1.10	9.36
24	E5a_E6a	KnownJunction	0	2.57	0.00	0.86	0.00	4.38	4.45	4.67
25	E5a_E7a	KnownJunction	0	4.59	2.94	6.37	10.92	14.87	4.10	4.26
26	ER6a	ExonRegion	0	4.80	0.03	6.69	1.13	18.90	2.03	11.06
27	E6a_E7a	KnownJunction	0	7.13	0.00	8.46	3.06	22.02	1.45	11.78
28	ER7a	ExonRegion	0	34.12	13.90	29.70	18.26	138.07	16.03	42.52
29	E7a_E8a	KnownJunction	1	44.48	12.03	28.47	39.53	175.66	17.88	51.55
30	ER8a	ExonRegion	0	43.88	17.13	48.39	30.21	170.91	20.33	58.36
31	E8a_E9a	KnownJunction	0	47.30	14.27	42.42	37.33	205.17	18.68	59.27
32	ER9a	ExonRegion	0	47.69	11.72	38.59	31.66	212.44	11.80	61.93
33	E9a_E10a	KnownJunction	0	60.75	12.37	47.41	22.84	202.33	10.43	61.90
34	ER10a	ExonRegion	0	49.21	13.49	54.09	29.26	233.53	16.13	72.56
35	E10a_E11a	KnownJunction	1	69.90	8.54	51.73	24.46	180.87	24.79	57.63
36	ER11a	ExonRegion	1	79.52	7.90	59.75	33.95	239.55	19.30	67.30
37	E11a_E12a	KnownJunction	1	54.48	3.63	55.43	32.81	248.00	7.32	65.35
38	E11a_E13a	NovelJunction	0	6.33	1.23	3.99	2.60	16.85	0.00	2.85
39	ER12a	ExonRegion	0	56.19	12.22	64.28	28.16	299.43	20.72	69.02
40	E12a_E13a	KnownJunction	0	75.96	13.00	75.42	39.44	349.48	21.33	63.32
41	ER13a	ExonRegion	0	74.98	17.93	74.11	33.00	262.44	19.83	69.47
42	E13a_E14a	KnownJunction	0	57.31	19.99	62.09	38.20	301.21	20.56	59.92
43	ER14a	ExonRegion	0	83.39	18.09	82.33	33.57	360.27	17.35	64.25
44	E14a_E15a	KnownJunction	0	90.64	19.68	81.12	30.64	367.07	18.33	73.68
45	ER15a	ExonRegion	0	88.57	24.87	85.69	38.95	329.50	24.07	85.63
46	E15a_E16a	KnownJunction	0	78.41	22.17	77.00	33.05	331.20	17.04	69.64
47	ER16a	ExonRegion	0	71.02	27.98	68.89	25.19	291.59	15.25	74.08
48	E16a_E17a	KnownJunction	0	31.41	17.29	50.54	21.70	200.03	13.29	50.85
49	ER17a	ExonRegion	0	42.41	14.50	52.20	22.50	205.56	12.77	53.17
50	E17a_E18a	KnownJunction	0	45.15	17.42	49.42	24.06	267.44	8.47	57.11
51	ER18a	ExonRegion	0	50.14	16.27	58.37	22.21	244.67	19.59	61.09
52	E18a_E19a	KnownJunction	0	48.00	9.12	50.57	28.58	233.34	17.96	60.89
53	ER19a	ExonRegion	0	69.91	15.44	70.49	25.64	338.42	24.64	70.45
54	E19a_E20a	KnownJunction	0	91.11	17.97	90.33	36.06	323.48	34.06	86.81
55	E20_Aa	NovelBoundary	1	36.60	0.00	33.43	0.00	0.00	0.00	0.00
56	ER20a	ExonRegion	0	87.82	22.02	79.42	27.54	383.95	26.17	77.09
57	E20a_E21a	KnownJunction	0	51.66	12.79	60.34	28.55	330.14	18.25	49.90
58	ER21a	ExonRegion	0	46.82	19.17	64.60	32.23	257.99	20.42	69.14
59	E21a_E22a	KnownJunction	0	51.57	22.57	73.22	37.95	261.19	27.55	82.88
60	ER22a	ExonRegion	0	40.60	20.98	68.22	25.82	192.45	21.19	71.59
61	E22a_E23a	KnownJunction	0	39.74	19.31	62.08	15.79	162.66	18.63	85.43
62	ER23a	ExonRegion	0	38.35	13.49	63.41	14.84	156.19	15.59	69.18
63	E23a_E24a	KnownJunction	0	40.74	8.77	64.45	13.25	157.31	12.49	59.58
64	ER24a	ExonRegion	1	57.76	7.54	67.59	15.21	214.28	29.18	58.32
65	E24a_E25a	KnownJunction	0	41.81	11.38	62.74	19.97	171.93	13.21	47.91
66	ER25a	ExonRegion	0	76.88	19.27	87.55	24.03	254.66	25.80	67.27
67	E25a_E26a	KnownJunction	0	69.45	24.98	91.14	24.73	287.95	26.96	60.21
68	ER26a	ExonRegion	0	74.52	14.94	82.19	23.92	263.42	19.49	61.20
69	E26a_E27a	KnownJunction	1	72.94	7.46	72.77	30.75	306.99	18.73	60.23
70	ER27a	ExonRegion	0	58.73	11.82	68.95	32.18	335.16	22.85	68.55
71	E27a_E28a	KnownJunction	0	71.33	18.86	64.61	34.24	272.30	23.32	73.99
72	ER28a	ExonRegion	0	55.55	19.65	65.13	20.16	314.65	23.45	65.10
73	E28a_E29a	KnownJunction	0	63.69	20.57	77.60	28.23	410.64	12.86	76.17
74	ER29a	ExonRegion	0	69.75	15.20	69.66	28.26	429.37	13.01	72.18
75	E29a_E30a	KnownJunction	0	67.31	15.00	77.08	32.83	399.67	16.64	60.79
76	ER30a	ExonRegion	0	77.71	19.33	70.57	34.30	392.62	18.57	69.69
77	E30a_E31a	KnownJunction	0	68.48	30.03	66.36	43.78	407.23	27.28	64.09
78	ER31a	ExonRegion	0	72.66	26.01	72.73	40.83	431.41	38.49	80.44
79	E31a_E32a	KnownJunction	1	59.42	14.37	51.55	41.40	358.15	37.39	71.23
80	ER32a	ExonRegion	0	40.33	13.71	44.72	25.98	231.38	21.30	52.62
81	E32_Da	KnownBoundary	0	27.99	11.80	18.11	10.92	128.40	8.28	25.70
82	ER32b	ExonRegion	0	31.75	13.77	31.12	18.50	136.06	7.33	33.20
83	E32_Db	KnownBoundary	0	23.52	11.19	34.76	18.64	156.44	6.59	30.20
84	ER32c	ExonRegion	0	12.21	3.86	13.13	6.09	90.39	3.74	12.08