Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MEMO1	Gene	0	62.61	43.13	85.55	61.25	69.11	38.78	72.57
2	404530	Transcript	0	5.53	1.42	6.13	0.42	11.36	2.03	2.94
3	295065	Transcript	0	2.58	6.10	1.03	8.23	2.10	9.62	1.58
4	407893	Transcript	0	1.69	0.63	2.35	0.65	1.13	0.64	1.75
5	379383	Transcript	0	0.26	0.00	0.00	0.00	0.30	0.00	0.00
6	IG34_AR6	ActiveIntergenicRegion	0	3.41	0.92	3.92	0.95	8.88	1.37	1.77
7	ER1a	ExonRegion	0	2.07	0.00	0.80	0.00	5.52	0.00	0.63
8	E1a_E2c	KnownJunction	0	4.72	0.00	2.70	0.00	16.21	3.32	3.47
9	ER2a	ExonRegion	0	2.58	6.10	1.03	8.23	2.10	9.62	1.58
10	E2_Ab	KnownBoundary	0	6.76	15.89	4.71	17.96	3.02	12.73	3.60
11	ER2b	ExonRegion	0	5.78	16.14	3.25	15.37	9.15	12.28	5.42
12	E2_Ac	KnownBoundary	0	6.84	17.81	6.22	15.71	5.67	19.59	9.49
13	ER2c	ExonRegion	0	5.79	6.80	6.74	7.64	18.22	12.05	6.31
14	E2a_E4a	KnownJunction	0	13.15	15.97	17.22	13.14	39.84	16.27	15.97
15	ER3a	ExonRegion	0	0.52	0.00	0.00	0.00	0.59	0.00	0.00
16	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	1	38.44	11.29	47.03	17.87	86.71	28.56	41.32
18	E4_Da	NovelBoundary	0	1.03	2.47	1.55	2.84	5.23	10.72	0.77
19	E4a_E5a	KnownJunction	0	65.42	33.63	72.86	55.29	95.05	40.92	68.65
20	E4a_E7a	NovelJunction	1	7.28	12.16	6.55	6.77	3.53	0.00	4.63
21	ER5a	ExonRegion	0	60.95	51.36	93.68	77.46	99.60	46.50	99.52
22	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E5a_E7a	KnownJunction	0	84.53	79.26	113.48	105.01	92.35	64.35	114.39
24	ER6a	ExonRegion	0	3.38	1.26	4.69	1.30	2.26	1.28	3.50
25	ER7a	ExonRegion	0	115.89	138.38	166.18	161.79	139.77	113.91	153.64
26	E7a_E8a	KnownJunction	0	185.69	201.84	227.17	216.59	216.90	130.97	190.59
27	ER8a	ExonRegion	0	198.08	155.23	254.24	223.79	262.15	119.44	211.93
28	E8_Da	NovelBoundary	0	11.57	11.64	25.15	7.23	7.91	2.06	12.00
29	E8a_E9a	KnownJunction	0	236.71	121.30	251.48	122.97	181.33	66.62	165.30
30	E8a_E10a	NovelJunction	0	12.87	6.70	10.17	13.74	12.24	9.06	20.01
31	E8a_E11a	NovelJunction	1	18.04	47.92	40.51	107.77	10.54	86.67	12.51
32	E8a_E12a	NovelJunction	0	1.80	8.64	6.71	9.24	0.00	10.99	0.00
33	ER9a	ExonRegion	0	235.40	99.91	283.58	120.82	212.87	67.80	186.41
34	E9a_E10a	KnownJunction	0	202.87	60.53	212.48	56.30	254.50	47.94	151.81
35	E9a_E11a	NovelJunction	1	35.78	25.72	69.34	70.25	55.40	25.59	27.66
36	ER10a	ExonRegion	0	149.02	40.50	210.27	53.17	207.31	38.67	166.13
37	E10a_E11a	KnownJunction	0	116.75	43.79	177.79	53.02	109.48	46.52	148.26
38	I10_AR9	ActiveIntronRegion	0	16.25	3.64	13.74	1.25	0.81	1.58	6.75
39	I10_AR10	ActiveIntronRegion	0	22.03	4.76	15.58	0.21	0.54	3.68	5.23
40	ER11a	ExonRegion	0	101.62	36.85	146.77	73.39	118.74	46.91	139.37
41	E11a_E12a	KnownJunction	1	119.60	28.85	188.21	102.68	76.37	61.45	187.76
42	ER12a	ExonRegion	0	51.59	43.92	80.25	71.91	41.09	43.69	74.02
43	ER12b	ExonRegion	0	9.80	4.25	14.90	1.25	12.35	2.76	4.72
44	IG33	Intergenic	0	4.96	1.92	9.19	4.76	3.55	2.29	12.18
45	IG33_AR10	ActiveIntergenicRegion	0	13.20	4.91	23.11	14.54	8.64	9.82	21.17
46	IG33_AR9	ActiveIntergenicRegion	0	6.42	3.45	12.22	11.33	6.06	1.66	12.82
47	IG33_SR7	SilentIntergenicRegion	0	6.45	2.11	7.17	1.25	3.43	0.00	8.38
48	IG33_AR8	ActiveIntergenicRegion	0	7.43	6.14	24.93	9.55	9.64	4.40	21.67
49	IG33_SR6	SilentIntergenicRegion	0	5.70	1.15	10.05	4.27	3.68	1.96	7.57
50	IG33_AR7	ActiveIntergenicRegion	0	7.48	5.00	17.59	11.36	7.36	3.34	11.70
51	IG33_AR6	ActiveIntergenicRegion	0	12.20	3.24	24.98	15.02	12.15	7.05	16.64
52	IG33_AR5	ActiveIntergenicRegion	0	2.45	0.71	6.80	1.97	1.98	1.04	13.43
53	IG33_SR5	SilentIntergenicRegion	0	2.84	0.92	5.07	1.73	2.35	0.34	11.19
54	IG33_AR4	ActiveIntergenicRegion	0	2.78	1.76	5.32	0.93	2.47	1.35	13.11
55	IG33_SR4	SilentIntergenicRegion	0	3.26	1.38	4.64	1.37	1.04	0.91	13.32
56	IG33_AR3	ActiveIntergenicRegion	0	2.32	1.56	2.39	1.43	1.23	0.51	10.10
57	IG33_SR3	SilentIntergenicRegion	0	1.41	0.65	2.01	1.99	0.31	0.82	8.86
58	IG33_AR2	ActiveIntergenicRegion	0	7.45	3.24	5.20	1.99	0.50	1.96	16.89
59	IG33_AR1	ActiveIntergenicRegion	0	1.95	0.54	3.86	1.38	0.13	0.00	10.39
60	IG33_SR1	SilentIntergenicRegion	0	1.17	1.59	1.54	1.25	0.24	0.55	11.61