Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BRE	Gene	0	126.40	46.82	81.56	42.52	100.10	103.69	122.29
2	379623	Transcript	0	0.00	0.00	0.00	0.00	0.23	0.00	0.00
3	379629	Transcript	0	0	0	0	0	0	0	0
4	379632	Transcript	0	0	0	0	0	0	0	0
5	342045	Transcript	0	0	0	0	0	0	0	0
6	344773	Transcript	1	19.52	5.71	16.01	15.67	11.71	36.99	23.91
7	379624	Transcript	0	0	0	0	0	0	0	0
8	361704	Transcript	0	0	0	0	0	0	0	0
9	IG5	Intergenic	0	2.36	5.00	2.38	35.93	0.16	515.85	0.38
10	IG5_AR1	ActiveIntergenicRegion	0	2.37	5.03	2.39	36.18	0.16	519.43	0.39
11	ER1a	ExonRegion	1	0.01	2.49	0.41	7.97	0.00	148.26	0.00
12	E1_Ab	KnownBoundary	1	0.00	5.83	0.82	11.68	0.00	257.20	0.00
13	ER1b	ExonRegion	1	3.89	3.87	1.34	19.08	1.31	273.64	1.52
14	E1_Ac	KnownBoundary	1	9.68	2.65	4.25	31.15	5.21	362.20	5.40
15	ER1c	ExonRegion	1	23.30	10.74	7.96	38.08	12.26	317.02	21.98
16	E1_Ad	KnownBoundary	1	43.49	21.12	18.72	44.29	25.89	270.01	37.69
17	ER1d	ExonRegion	1	67.15	27.62	27.19	41.74	94.80	129.21	70.60
18	E1_Da	NovelBoundary	1	1.72	4.12	4.30	26.87	0.00	524.07	0.00
19	E1a_E2a	KnownJunction	0	7.03	5.54	8.82	10.40	11.04	2.04	11.01
20	E1a_E3a	KnownJunction	0	65.36	24.93	31.28	23.35	136.77	15.28	77.43
21	I1_AR1	ActiveIntronRegion	1	1.26	8.61	8.13	90.80	0.32	1161.19	0.00
22	ER2a	ExonRegion	0	7.60	5.47	5.80	6.90	7.58	3.98	7.14
23	E2a_E3a	KnownJunction	0	9.33	7.20	2.28	5.20	4.20	1.26	4.36
24	ER3a	ExonRegion	0	96.75	67.74	78.41	55.03	67.24	41.56	122.05
25	E3a_E4a	KnownJunction	0	194.79	103.35	140.27	78.54	113.37	66.57	188.21
26	ER4a	ExonRegion	0	173.18	89.60	123.71	61.44	170.76	58.15	185.36
27	E4a_E5a	KnownJunction	0	167.52	87.64	125.87	57.65	191.29	50.87	183.36
28	ER5a	ExonRegion	0	210.36	107.38	158.13	73.60	124.50	118.11	220.96
29	E5a_E6a	KnownJunction	0	223.95	67.41	141.85	43.91	105.35	175.75	145.64
30	ER6a	ExonRegion	0	154.82	59.40	110.84	45.93	96.16	121.08	136.42
31	E6a_E7a	KnownJunction	0	185.01	58.16	131.13	41.88	143.14	120.60	160.86
32	ER7a	ExonRegion	0	167.24	81.74	106.41	45.46	122.68	129.82	153.38
33	E7a_E8a	KnownJunction	0	110.60	83.07	93.74	50.36	85.46	124.59	118.88
34	ER8a	ExonRegion	0	132.36	73.92	111.13	52.80	123.20	132.78	177.33
35	E8a_E9a	KnownJunction	0	197.73	69.12	118.73	55.21	190.90	99.24	176.38
36	ER9a	ExonRegion	0	166.33	63.54	110.75	60.89	183.51	132.08	199.18
37	E9a_E10a	KnownJunction	0	150.84	70.80	109.79	74.80	201.69	143.35	223.33
38	ER10a	ExonRegion	0	279.26	63.84	151.09	61.08	235.19	115.87	239.98
39	E10a_E11a	KnownJunction	0	382.60	46.03	184.21	45.70	180.39	107.95	237.00
40	E10a_E12a	NovelJunction	0	8.11	24.85	8.92	27.42	0.00	84.04	3.80
41	ER11a	ExonRegion	0	231.94	47.76	142.64	46.87	175.34	101.39	223.87
42	E11a_E12a	KnownJunction	0	161.74	41.88	97.47	50.50	126.72	84.87	200.22
43	ER12a	ExonRegion	0	252.52	59.04	141.61	60.29	220.86	126.46	205.41
44	E12a_E13a	KnownJunction	1	18.76	2.63	5.50	8.21	14.22	8.50	25.37
45	E12a_E15a	KnownJunction	0	7.73	5.52	5.95	7.53	2.01	18.14	12.21
46	E12a_E16a	KnownJunction	0	234.73	28.32	136.09	48.76	172.71	76.86	143.50
47	ER13a	ExonRegion	1	17.35	1.89	6.32	2.79	18.05	7.70	26.39
48	E13a_E16a	KnownJunction	1	11.82	1.39	6.21	0.00	6.57	8.90	16.02
49	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.23	0.00	0.00
50	ER15a	ExonRegion	0	12.61	8.94	9.70	14.11	7.86	31.76	17.49
51	E15_Da	NovelBoundary	0	9.03	6.02	9.67	7.02	6.62	30.42	14.00
52	E15b_E16a	KnownJunction	1	19.71	4.39	16.73	15.39	12.61	39.05	23.98
53	ER15b	ExonRegion	1	19.32	7.03	15.29	15.94	10.82	34.94	23.85
54	ER16a	ExonRegion	0	129.93	38.75	75.82	43.06	94.70	101.45	110.31
55	ER16b	ExonRegion	0	2.31	0.81	1.35	0.00	1.62	2.04	6.97