Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CGREF1	Gene	0	2.97	4.02	10.15	3.81	4.67	1.92	4.83
2	402550	Transcript	0	0.31	1.48	3.18	1.39	0.60	0.46	0.45
3	389521	Transcript	0	0	0	0	0	0	0	0
4	402394	Transcript	0	3.73	2.49	8.68	4.10	3.05	2.17	2.39
5	260595	Transcript	0	4.52	4.36	10.02	3.55	8.37	2.68	9.82
6	312734	Transcript	0	0.38	0.61	2.03	0.00	0.00	0.00	0.34
7	405600	Transcript	0	0.00	0.00	0.01	0.00	0.01	0.00	0.00
8	404694	Transcript	0	0.77	1.55	0.34	4.20	0.37	2.06	0.22
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1b	ExonRegion	0	0.00	0.60	0.00	0.00	0.00	0.00	0.00
11	E1_Ac	KnownBoundary	0	0.00	1.58	0.00	0.00	0.00	0.00	0.00
12	ER1c	ExonRegion	0	0.09	2.58	0.69	0.49	0.03	0.00	0.97
13	E1_Ad	KnownBoundary	0	0.68	2.99	6.29	1.60	0.00	0.00	2.84
14	ER1d	ExonRegion	0	2.88	2.31	7.88	1.29	0.92	0.00	2.21
15	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E1a_E2a	KnownJunction	0	1.62	1.63	5.76	1.46	0.95	1.26	0.54
17	E1a_E3b	KnownJunction	0	1.03	0.00	4.22	1.65	0.95	0.00	1.61
18	ER1e	ExonRegion	0	0.00	0.00	0.02	0.00	0.01	0.00	0.00
19	E1b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E2_Aa	NovelBoundary	0	23.22	27.85	39.72	26.60	3.27	36.53	44.59
21	ER2a	ExonRegion	0	2.71	2.62	9.46	2.81	8.79	1.42	4.98
22	E2a_E3b	KnownJunction	0	4.52	4.36	10.02	3.55	8.37	2.68	9.82
23	E2b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER2b	ExonRegion	0	0.77	1.21	4.06	0.00	0.00	0.00	0.67
25	ER3a	ExonRegion	0	0.77	1.55	0.34	4.20	0.37	2.06	0.22
26	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.76
27	ER3b	ExonRegion	0	5.40	6.30	22.93	5.63	14.65	2.87	16.82
28	E3a_E4a	KnownJunction	0	5.39	8.67	29.43	3.87	18.14	5.41	21.37
29	ER4a	ExonRegion	0	8.53	16.64	25.18	4.70	14.52	6.59	16.45
30	E4a_E5a	KnownJunction	0	11.52	14.74	18.88	3.33	10.93	7.99	15.85
31	ER5a	ExonRegion	0	9.98	11.58	24.06	3.48	10.40	5.15	14.26
32	E5a_E6a	KnownJunction	0	6.39	12.51	28.35	2.76	16.99	5.60	13.56
33	ER6a	ExonRegion	0	7.65	13.44	26.56	5.36	12.52	5.51	14.99
34	E6a_E7a	KnownJunction	0	6.56	6.78	9.77	4.58	6.39	4.80	10.12
35	E6a_E8a	KnownJunction	0	0.00	0.97	1.24	0.00	0.00	0.00	0.00
36	ER7a	ExonRegion	0	5.55	4.75	12.88	5.30	7.72	2.60	8.30
37	E7_Da	KnownBoundary	0	4.44	2.18	8.67	1.65	2.14	0.00	1.58
38	E7a_E7b	KnownJunction	0	6.13	5.04	23.04	4.50	10.17	1.31	11.51
39	ER7b	ExonRegion	0	2.05	0.61	7.93	2.45	5.22	1.23	3.39
40	E7_Ab	KnownBoundary	0	0.00	0.00	5.03	0.00	3.55	0.00	2.24
41	ER7c	ExonRegion	0	4.70	3.57	15.83	3.81	6.37	1.95	10.53
42	E7_Db	KnownBoundary	0	3.81	5.60	25.61	2.87	6.27	4.48	10.30
43	ER7d	ExonRegion	0	3.70	5.37	24.84	2.83	4.18	4.09	11.57
44	E7_Dc	KnownBoundary	0	3.35	4.76	15.51	4.69	6.64	1.31	10.26
45	ER7e	ExonRegion	0	4.76	6.62	15.98	3.12	8.87	1.01	11.13
46	E7_Dd	KnownBoundary	0	4.86	9.04	25.10	4.58	15.86	1.21	11.94
47	ER7f	ExonRegion	0	4.77	6.24	16.93	4.68	9.04	0.20	8.42
48	E7_De	KnownBoundary	0	5.52	3.57	9.20	5.74	3.16	0.00	8.28
49	ER7g	ExonRegion	0	3.73	2.49	8.68	4.10	3.05	2.17	2.39
50	E7_Df	NovelBoundary	0	0.98	0.00	4.56	14.98	1.18	5.63	0.66
51	E8_Aa	NovelBoundary	0	1.03	4.73	7.33	17.64	14.04	11.47	4.21
52	ER8a	ExonRegion	0	0.94	3.48	8.29	4.16	1.81	1.37	1.34