Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C2orf43	Gene	0	28.62	1.41	17.51	1.12	92.93	1.43	26.60
2	381090	Transcript	0	0.00	0.00	0.41	0.00	0.00	0.00	0.00
3	402479	Transcript	0	0.00	0.86	0.00	0.00	0.14	0.00	0.39
4	403006	Transcript	0	4.98	0.00	0.39	0.00	10.34	0.00	0.79
5	237822	Transcript	0	28.96	0.94	19.74	1.04	112.04	0.99	34.25
6	ER1a	ExonRegion	0	0.00	0.00	0.41	0.00	0.00	0.00	0.00
7	ER1b	ExonRegion	0	0.26	0.00	0.68	0.00	0.00	0.00	0.00
8	ER1c	ExonRegion	1	11.67	0.30	5.95	0.37	16.74	0.00	4.81
9	E1_Ad	NovelBoundary	0	21.16	1.02	10.89	1.11	44.56	1.23	10.63
10	E1a_E2a	KnownJunction	0	34.95	1.63	10.25	1.68	174.69	0.00	27.22
11	E1a_E3a	KnownJunction	0	8.43	0.00	0.78	0.00	19.87	0.00	1.58
12	ER1d	ExonRegion	0	33.32	1.21	11.74	1.25	124.26	0.00	19.63
13	ER2a	ExonRegion	0	18.08	0.49	6.99	1.49	50.49	0.72	19.53
14	E2a_E3a	KnownJunction	0	41.01	1.37	15.33	0.00	40.83	1.10	25.67
15	E2a_E5a	NovelJunction	0	6.66	1.05	0.70	0.00	12.15	1.47	5.17
16	ER3a	ExonRegion	0	47.87	3.23	19.28	0.89	141.31	1.87	41.23
17	E3a_E4a	KnownJunction	0	0.00	1.63	0.00	0.00	0.00	0.00	0.00
18	E3a_E5a	KnownJunction	0	80.73	2.31	27.95	1.57	148.09	4.72	47.48
19	ER4a	ExonRegion	0	0.00	0.09	0.00	0.00	0.27	0.00	0.79
20	ER5a	ExonRegion	0	98.37	3.73	36.71	0.92	212.20	2.60	54.27
21	E5a_E6a	KnownJunction	0	85.55	1.44	38.27	0.00	196.29	1.18	44.56
22	E5a_E7a	NovelJunction	0	5.96	0.00	4.93	0.00	9.71	0.00	4.57
23	ER6a	ExonRegion	0	57.17	2.09	29.81	0.74	155.10	3.15	35.47
24	E6a_E7a	KnownJunction	0	31.43	0.00	17.37	1.19	103.28	3.86	32.70
25	ER7a	ExonRegion	0	29.85	1.99	26.97	0.62	126.02	5.02	36.18
26	E7a_E8a	KnownJunction	0	45.61	3.60	39.53	1.60	152.82	5.44	33.78
27	ER8a	ExonRegion	0	46.72	4.17	35.50	3.20	135.38	4.54	47.52
28	E8_Da	KnownBoundary	0	56.43	2.73	34.98	4.12	162.34	3.75	49.40
29	E8a_E8b	KnownJunction	0	0.90	0.00	0.00	0.00	1.18	0.00	0.57
30	ER8b	ExonRegion	0	34.70	1.32	24.07	1.11	130.28	1.48	37.56
31	E8_Ab	KnownBoundary	0	35.00	0.00	33.22	1.16	137.69	1.07	51.25
32	ER8c	ExonRegion	0	33.71	2.39	25.01	3.12	199.22	3.38	58.35
33	E8_Db	KnownBoundary	1	20.06	0.00	15.12	0.00	123.86	1.47	36.20
34	E8b_E9a	KnownJunction	0	8.45	0.00	0.72	0.00	12.47	0.00	5.69
35	ER8d	ExonRegion	0	23.22	0.57	15.42	0.97	93.80	0.51	30.95
36	E8_Dc	NovelBoundary	0	10.58	0.00	12.52	0.00	16.07	1.66	3.35
37	I8_AR1	ActiveIntronRegion	0	10.34	0.72	6.52	0.00	17.33	0.00	3.18
38	E9_Aa	NovelBoundary	1	20.70	1.42	15.66	0.00	18.58	0.00	6.08
39	ER9a	ExonRegion	0	11.61	1.25	8.16	1.30	24.86	0.85	5.18
40	ER9b	ExonRegion	0	1.54	0.00	0.00	0.00	0.81	0.00	0.00