Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BIRC6	Gene	0	126.53	95.29	185.14	138.26	102.58	57.00	98.03
2	261359	Transcript	0	125.96	96.03	185.33	140.80	104.45	57.44	97.36
3	IG40_AR1	ActiveIntergenicRegion	0	32.61	8.94	35.00	13.03	26.63	18.04	16.08
4	IG40_AR2	ActiveIntergenicRegion	0	6.75	5.26	9.93	12.47	3.24	17.03	8.10
5	IG40_AR3	ActiveIntergenicRegion	0	4.73	2.46	9.71	4.16	2.32	7.97	3.53
6	ER1a	ExonRegion	0	6.10	21.19	8.88	23.50	3.60	6.95	9.76
7	E1a_E2a	KnownJunction	1	23.33	69.99	58.85	78.84	10.40	18.20	31.87
8	ER2a	ExonRegion	0	70.43	117.45	117.74	113.56	30.77	53.61	65.10
9	E2a_E3a	KnownJunction	0	68.04	126.02	140.66	151.22	26.51	82.44	73.53
10	ER3a	ExonRegion	0	98.82	124.85	150.36	156.45	41.40	72.80	77.65
11	E3a_E4a	KnownJunction	0	66.06	132.93	133.16	177.23	53.76	74.77	72.29
12	ER4a	ExonRegion	0	73.86	124.69	124.04	164.53	38.69	60.79	68.63
13	E4a_E5a	KnownJunction	0	61.35	97.39	110.97	117.66	34.19	51.08	68.70
14	ER5a	ExonRegion	0	92.21	137.43	139.20	171.52	50.90	62.78	75.13
15	E5a_E6a	KnownJunction	0	112.79	134.06	177.34	173.14	57.89	38.06	57.64
16	ER6a	ExonRegion	0	129.22	153.92	179.17	211.80	52.82	58.12	82.37
17	E6a_E7a	KnownJunction	0	114.39	141.97	167.76	195.68	48.62	73.32	87.02
18	ER7a	ExonRegion	0	113.38	106.46	150.99	172.28	43.30	50.49	69.24
19	E7a_E8a	KnownJunction	0	94.87	88.88	141.48	123.18	45.97	45.18	59.89
20	ER8a	ExonRegion	0	114.60	97.30	156.88	131.14	41.20	42.49	54.96
21	E8a_E9a	KnownJunction	1	132.82	105.93	170.95	142.55	26.35	34.89	43.68
22	ER9a	ExonRegion	1	136.96	117.37	174.21	138.26	41.70	46.63	53.81
23	E9a_E10a	KnownJunction	0	127.63	100.36	152.15	143.53	48.60	48.80	55.52
24	ER10a	ExonRegion	0	132.80	86.50	187.33	122.75	38.54	37.76	65.01
25	E10a_E11a	KnownJunction	0	86.55	54.99	127.68	80.79	41.66	26.37	49.29
26	ER11a	ExonRegion	0	130.91	73.05	184.61	132.49	57.70	31.54	57.89
27	E11a_E12a	KnownJunction	1	216.10	72.51	255.61	182.59	57.26	50.62	68.46
28	ER12a	ExonRegion	0	146.19	94.32	184.45	143.72	61.94	37.44	67.95
29	E12a_E13a	KnownJunction	0	77.07	81.02	119.50	120.09	30.55	23.56	58.30
30	E13_Aa	NovelBoundary	1	33.20	1.31	51.24	0.00	1.18	0.00	0.86
31	ER13a	ExonRegion	0	85.02	88.20	151.04	118.76	44.54	28.04	68.52
32	E13a_E14a	KnownJunction	1	36.83	48.89	82.47	59.76	40.37	7.13	26.81
33	E13a_E15a	NovelJunction	0	11.30	26.95	27.91	54.97	8.44	16.78	21.43
34	E14_Aa	NovelBoundary	0	64.46	10.11	65.04	22.95	17.66	10.02	22.23
35	ER14a	ExonRegion	0	61.35	46.04	101.22	63.05	35.36	20.08	39.13
36	E14a_E15a	KnownJunction	0	67.84	53.09	108.57	56.84	43.94	24.76	42.26
37	ER15a	ExonRegion	0	69.98	84.40	128.04	92.25	44.93	24.58	65.76
38	E15a_E16a	KnownJunction	0	74.95	101.64	137.88	83.06	36.49	39.21	65.94
39	ER16a	ExonRegion	0	93.48	81.92	163.90	100.39	44.64	31.77	70.00
40	E16a_E17a	KnownJunction	0	103.86	68.86	212.38	114.16	29.35	39.56	65.55
41	E16a_E18a	NovelJunction	0	3.62	3.10	6.16	10.00	0.00	1.66	0.00
42	ER17a	ExonRegion	0	99.52	64.82	186.29	85.53	38.59	35.20	56.33
43	E17a_E18a	KnownJunction	0	108.47	69.59	195.44	69.08	36.12	29.48	58.95
44	ER18a	ExonRegion	0	91.95	61.40	167.37	87.64	40.99	35.46	64.72
45	E18a_E19a	KnownJunction	0	109.40	76.74	159.31	97.91	49.19	37.73	55.51
46	ER19a	ExonRegion	0	182.04	88.52	219.72	136.26	72.41	39.87	85.69
47	E19a_E20a	KnownJunction	0	174.36	96.99	204.39	138.16	82.97	41.65	79.75
48	ER20a	ExonRegion	0	242.28	110.39	259.00	172.20	82.05	50.25	102.25
49	E20a_E21a	KnownJunction	0	212.91	81.84	217.16	134.81	83.82	32.27	98.56
50	ER21a	ExonRegion	0	146.75	78.59	173.13	118.12	65.08	39.51	84.39
51	E21a_E22a	KnownJunction	0	105.65	66.47	127.78	124.10	43.04	29.40	68.72
52	ER22a	ExonRegion	0	81.10	71.75	161.37	119.54	47.20	35.54	82.19
53	E22a_E23a	KnownJunction	1	50.94	81.97	155.67	136.35	56.27	40.52	65.84
54	ER23a	ExonRegion	0	73.64	82.71	156.09	130.75	41.68	41.32	78.58
55	E23_Da	NovelBoundary	0	18.94	20.07	30.36	41.64	5.12	15.84	13.69
56	E23a_E24a	KnownJunction	1	49.30	73.27	90.00	73.15	30.82	19.22	53.21
57	ER24a	ExonRegion	0	85.32	95.33	142.11	114.24	57.93	37.01	80.40
58	E24a_E25a	KnownJunction	0	99.46	83.60	149.87	99.45	57.70	34.57	91.71
59	ER25a	ExonRegion	0	161.13	93.49	208.98	119.40	74.72	54.63	96.50
60	E25a_E26a	KnownJunction	0	121.77	57.82	169.34	113.89	61.07	37.14	67.37
61	E25a_E27a	NovelJunction	0	5.16	4.44	5.72	8.89	0.00	4.80	1.58
62	ER26a	ExonRegion	0	115.93	48.76	146.86	92.54	55.60	34.19	70.66
63	E26a_E27a	KnownJunction	0	73.34	45.50	106.71	50.36	31.65	21.92	52.57
64	ER27a	ExonRegion	0	81.55	71.34	138.41	90.01	50.76	37.06	73.06
65	E27a_E28a	KnownJunction	0	103.66	71.20	139.06	113.62	50.30	43.07	69.59
66	ER28a	ExonRegion	0	119.43	105.91	173.63	132.73	67.96	46.40	87.10
67	E28a_E29a	KnownJunction	0	109.52	94.16	151.29	113.08	84.77	39.07	64.92
68	ER29a	ExonRegion	0	141.93	87.67	189.99	128.07	81.94	42.44	85.16
69	E29a_E30a	KnownJunction	0	132.79	77.32	163.38	113.92	66.48	28.27	70.80
70	ER30a	ExonRegion	0	105.90	90.00	156.55	128.51	64.54	43.72	79.06
71	E30a_E31a	KnownJunction	0	84.45	68.36	132.32	142.80	56.20	51.62	67.60
72	ER31a	ExonRegion	0	87.64	61.66	142.96	110.79	48.88	39.20	78.31
73	E31a_E32a	KnownJunction	0	82.05	65.26	147.58	96.99	48.55	32.13	69.71
74	ER32a	ExonRegion	0	66.73	68.59	125.80	80.29	44.88	30.77	65.34
75	E32_Da	NovelBoundary	0	70.16	52.12	106.89	70.44	48.20	15.84	58.01
76	E32a_E33a	KnownJunction	0	34.08	26.11	56.95	34.22	11.60	11.50	18.93
77	ER33a	ExonRegion	0	120.33	69.63	178.50	97.45	53.68	48.02	87.89
78	E33a_E34a	KnownJunction	0	120.70	86.28	198.40	123.48	56.50	87.26	92.68
79	ER34a	ExonRegion	0	129.81	84.85	211.16	117.21	66.70	62.39	83.82
80	E34a_E35a	KnownJunction	0	101.37	55.85	176.90	93.76	70.91	28.46	67.73
81	E34a_E36a	NovelJunction	0	2.65	5.75	3.15	11.78	1.08	2.73	2.98
82	ER35a	ExonRegion	0	89.05	61.27	170.86	108.83	57.68	28.25	68.79
83	E35a_E36a	KnownJunction	0	62.89	66.94	154.38	124.67	53.37	39.23	55.78
84	ER36a	ExonRegion	0	93.69	87.38	144.36	128.04	69.86	50.07	71.68
85	E36a_E37a	KnownJunction	0	93.86	87.48	116.59	126.35	62.33	47.14	57.83
86	ER37a	ExonRegion	0	100.27	96.56	142.78	147.44	81.34	46.41	79.79
87	E37a_E38a	KnownJunction	0	127.04	98.86	178.36	137.41	91.82	45.67	79.90
88	ER38a	ExonRegion	0	132.00	118.27	195.47	183.24	91.17	55.13	109.17
89	E38a_E39a	KnownJunction	0	86.90	120.85	156.33	175.88	86.93	56.09	93.20
90	E39_Aa	NovelBoundary	0	49.37	57.06	80.23	72.04	32.30	17.31	40.04
91	ER39a	ExonRegion	0	104.72	111.45	184.09	158.41	90.99	60.87	105.45
92	E39a_E40a	KnownJunction	0	98.55	88.11	172.01	130.82	59.89	56.98	97.96
93	ER40a	ExonRegion	0	107.01	98.49	166.63	124.93	71.43	47.80	84.56
94	E40a_E41a	KnownJunction	0	97.34	97.26	163.16	130.39	77.09	56.82	84.20
95	E40a_E42a	NovelJunction	0	2.85	2.15	4.18	8.18	0.00	5.63	3.00
96	ER41a	ExonRegion	0	101.57	89.12	168.77	111.57	72.97	48.37	81.59
97	E41a_E42a	KnownJunction	0	91.79	61.00	146.62	87.83	71.42	41.27	63.76
98	E42_Aa	NovelBoundary	1	42.29	1.31	63.06	1.11	3.04	0.00	5.50
99	ER42a	ExonRegion	0	115.97	81.87	181.93	102.15	87.50	51.45	88.79
100	E42a_E43a	KnownJunction	0	188.63	85.22	240.82	108.96	124.72	57.08	127.12
101	E42a_E44a	NovelJunction	1	10.78	14.08	3.79	7.12	0.00	0.00	1.53
102	ER43a	ExonRegion	0	148.80	84.74	218.36	113.86	104.12	48.76	127.55
103	E43a_E44a	KnownJunction	0	106.13	86.07	169.28	105.84	86.45	47.62	102.86
104	ER44a	ExonRegion	0	162.48	88.80	229.01	116.21	104.08	44.96	131.87
105	E44a_E45a	KnownJunction	0	96.13	83.12	171.73	103.54	114.43	53.68	113.86
106	ER45a	ExonRegion	0	119.31	85.95	202.26	99.15	89.72	36.82	101.01
107	E45a_E46a	KnownJunction	0	118.62	93.68	200.34	99.53	99.22	51.99	83.70
108	E45a_E47a	NovelJunction	1	1.03	9.59	6.98	6.18	2.19	0.00	7.68
109	ER46a	ExonRegion	0	142.29	85.15	201.14	119.15	94.09	44.35	89.47
110	E46a_E47a	KnownJunction	0	146.35	73.45	197.18	134.97	97.84	49.18	104.86
111	ER47a	ExonRegion	0	167.02	110.39	235.36	150.01	136.77	51.01	126.56
112	E47a_E48a	KnownJunction	0	181.22	128.91	244.12	163.44	110.52	68.55	139.80
113	ER48a	ExonRegion	0	213.35	129.18	266.49	161.60	145.92	65.46	134.84
114	E48a_E49a	KnownJunction	0	215.32	154.27	278.01	187.44	182.97	63.11	146.52
115	ER49a	ExonRegion	0	250.86	147.27	335.06	199.58	184.33	74.45	169.27
116	E49a_E50a	KnownJunction	0	226.27	129.20	285.54	172.06	188.39	75.39	161.30
117	ER50a	ExonRegion	0	155.26	130.64	213.13	155.34	145.66	50.60	141.69
118	E50a_E51a	KnownJunction	0	153.33	139.66	183.93	186.50	133.89	46.12	128.25
119	ER51a	ExonRegion	0	145.30	125.23	197.04	143.96	125.06	72.44	137.58
120	E51a_E52a	KnownJunction	0	89.17	120.53	129.25	141.04	132.51	61.45	102.63
121	ER52a	ExonRegion	0	128.57	125.59	187.44	155.37	133.34	65.95	126.21
122	E52a_E53a	KnownJunction	0	158.00	111.97	237.20	170.57	131.59	68.47	107.53
123	ER53a	ExonRegion	0	142.65	98.90	217.55	172.76	150.18	67.55	115.63
124	E53a_E54a	KnownJunction	0	130.23	85.88	194.83	171.62	145.67	59.15	115.91
125	ER54a	ExonRegion	0	136.03	122.26	214.68	192.37	143.73	60.26	130.59
126	E54a_E55a	KnownJunction	0	166.88	124.32	246.55	203.67	173.96	57.94	158.45
127	ER55a	ExonRegion	0	148.20	119.03	254.07	176.62	161.66	72.09	164.67
128	E55a_E56a	KnownJunction	0	143.18	101.80	240.13	173.44	201.02	90.80	175.96
129	ER56a	ExonRegion	0	157.88	124.59	257.62	195.64	165.52	105.28	174.54
130	E56a_E57a	KnownJunction	0	136.74	126.26	240.32	239.78	167.43	103.39	187.21
131	ER57a	ExonRegion	0	154.13	116.70	228.27	180.25	175.45	77.45	154.60
132	E57a_E58a	KnownJunction	0	132.94	103.27	238.69	158.73	140.02	68.18	119.57
133	ER58a	ExonRegion	0	157.84	105.78	249.84	152.04	141.80	62.10	119.89
134	E58a_E59a	KnownJunction	0	178.90	120.32	243.62	153.66	135.20	61.59	118.71
135	ER59a	ExonRegion	0	125.81	96.42	208.84	141.74	114.86	53.79	106.99
136	E59a_E60a	KnownJunction	0	100.19	79.76	192.88	106.31	132.72	59.50	114.19
137	ER60a	ExonRegion	0	112.66	66.37	208.57	102.31	127.49	50.64	108.04
138	E60a_E61a	KnownJunction	0	118.37	77.45	231.30	106.01	141.66	56.57	105.03
139	ER61a	ExonRegion	0	163.41	120.69	278.83	160.62	183.15	74.48	155.06
140	E61a_E62a	KnownJunction	0	155.83	123.29	257.73	177.74	180.11	80.75	161.96
141	ER62a	ExonRegion	0	242.03	142.28	293.42	200.66	284.05	93.46	175.32
142	E62a_E63a	KnownJunction	0	353.14	138.14	380.01	277.28	299.71	106.58	234.88
143	ER63a	ExonRegion	0	237.82	167.58	281.18	278.55	311.40	121.24	224.78
144	E63a_E64a	KnownJunction	0	108.47	129.36	181.94	233.53	250.63	103.85	175.98
145	ER64a	ExonRegion	0	109.44	121.60	173.71	203.03	216.66	94.28	139.24
146	E64a_E65a	KnownJunction	0	89.22	112.18	156.59	203.05	189.38	84.31	128.40
147	ER65a	ExonRegion	0	90.44	106.25	174.64	188.19	166.28	89.90	140.20
148	E65a_E66a	KnownJunction	0	94.98	84.57	183.90	150.11	204.64	86.11	124.22
149	E65a_E67a	NovelJunction	0	2.89	4.26	1.61	8.05	0.00	0.00	0.00
150	I65_AR2	ActiveIntronRegion	1	39.17	5.80	22.93	5.75	9.57	8.28	20.58
151	I65_AR3	ActiveIntronRegion	0	33.45	3.85	22.44	3.95	7.42	4.70	16.51
152	ER66a	ExonRegion	0	118.72	104.02	197.11	169.11	175.00	88.38	118.65
153	E66a_E67a	KnownJunction	0	142.53	71.85	188.25	126.62	113.35	57.99	94.56
154	ER67a	ExonRegion	0	175.93	81.46	262.94	146.65	172.82	66.56	102.26
155	E67a_E68a	KnownJunction	1	221.19	58.98	312.63	136.11	251.99	66.52	88.51
156	E67a_E69a	NovelJunction	0	12.35	8.04	2.28	10.29	1.13	2.49	5.40
157	ER68a	ExonRegion	0	202.39	88.93	291.11	159.00	201.24	96.73	111.46
158	E68a_E69a	KnownJunction	0	182.87	99.65	250.79	155.96	232.17	97.10	120.79
159	ER69a	ExonRegion	0	164.05	109.38	220.45	173.84	197.10	105.27	134.97
160	E69a_E70a	KnownJunction	0	136.12	96.86	175.58	157.59	205.70	94.60	151.28
161	ER70a	ExonRegion	0	155.71	118.28	215.14	187.31	212.95	105.34	152.47
162	E70a_E71a	KnownJunction	0	111.57	103.09	155.21	185.14	197.01	121.40	134.76
163	ER71a	ExonRegion	0	149.45	116.25	190.51	194.64	205.01	115.18	133.33
164	E71a_E72a	KnownJunction	0	152.65	99.33	206.23	184.52	202.06	98.57	101.07
165	E71a_E73a	NovelJunction	1	3.64	0.00	4.68	11.16	2.17	1.15	2.11
166	ER72a	ExonRegion	0	179.09	111.14	220.84	212.60	254.08	127.51	144.83
167	E72a_E73a	KnownJunction	0	255.41	146.38	273.07	236.10	296.94	166.45	147.33
168	ER73a	ExonRegion	0	189.99	155.64	213.11	263.71	252.22	146.01	150.99
169	E73a_E74a	KnownJunction	0	166.63	148.49	187.72	250.70	246.69	109.99	127.68
170	ER74a	ExonRegion	0	81.72	60.06	109.71	104.58	104.50	67.83	67.45