Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EIF2B4	Gene	0	83.78	85.28	167.88	106.36	174.18	60.55	90.18
2	347454	Transcript	0	38.94	38.83	87.17	34.86	65.02	17.73	45.60
3	405940	Transcript	0	59.53	30.34	83.52	47.38	52.88	14.31	39.55
4	ER1a	ExonRegion	0	0.69	0.00	1.64	1.98	3.76	0.00	0.83
5	E1_Ab	KnownBoundary	0	0.78	0.00	1.28	4.52	2.19	2.68	0.54
6	ER1b	ExonRegion	0	20.59	19.17	50.65	16.88	79.37	14.59	45.67
7	E1a_E2a	KnownJunction	0	52.16	41.17	118.37	35.65	132.28	31.44	100.29
8	E2_Aa	NovelBoundary	0	7.84	18.92	10.07	13.55	0.00	16.86	1.48
9	ER2a	ExonRegion	0	36.13	38.27	95.33	38.06	66.37	30.57	74.01
10	E2a_E3a	KnownJunction	0	15.76	29.90	53.99	42.26	21.58	17.85	19.12
11	ER3a	ExonRegion	0	58.63	65.04	116.40	68.88	49.77	47.27	59.09
12	E3a_E4a	KnownJunction	0	62.42	61.63	157.80	54.75	85.39	32.80	76.06
13	E3a_E4b	KnownJunction	0	59.53	30.34	83.52	47.38	52.88	14.31	39.55
14	E3a_E6a	NovelJunction	0	5.06	9.72	9.87	4.98	1.73	2.04	11.22
15	ER4a	ExonRegion	0	74.35	71.07	168.33	69.21	106.29	33.10	88.54
16	ER4b	ExonRegion	0	121.90	97.90	217.08	112.96	187.99	53.62	88.93
17	E4a_E5a	KnownJunction	0	114.59	77.84	224.68	121.91	134.74	56.47	89.74
18	E5_Aa	NovelBoundary	1	42.18	5.91	82.90	2.41	4.38	0.00	5.92
19	ER5a	ExonRegion	0	122.21	81.73	229.35	138.93	170.94	66.45	102.38
20	E5a_E6a	KnownJunction	0	159.94	82.41	319.47	125.05	234.70	81.28	118.29
21	ER6a	ExonRegion	0	153.75	99.54	340.87	130.21	274.54	83.53	122.35
22	E6_Da	NovelBoundary	1	20.35	25.46	16.27	10.97	21.81	4.48	23.42
23	E6a_E7a	KnownJunction	0	79.83	77.05	216.19	102.40	207.01	66.12	85.53
24	I6_AR2	ActiveIntronRegion	1	14.90	20.09	20.66	10.80	15.91	6.02	19.13
25	I6_SR1	SilentIntronRegion	1	22.63	11.90	18.18	8.20	17.34	4.35	23.52
26	E7_Aa	NovelBoundary	1	10.01	21.36	10.85	6.20	14.52	11.42	26.73
27	ER7a	ExonRegion	0	85.76	100.96	207.24	126.53	211.76	66.46	109.52
28	E7_Da	NovelBoundary	0	16.74	10.25	16.44	6.50	14.59	7.34	26.74
29	E7a_E8a	KnownJunction	0	126.71	136.80	311.09	156.59	313.33	64.21	113.75
30	ER8a	ExonRegion	0	107.50	105.91	263.36	130.38	245.38	77.86	113.18
31	E8a_E9a	KnownJunction	0	84.25	91.24	201.20	119.50	265.78	92.65	96.58
32	ER9a	ExonRegion	0	97.10	106.03	211.78	135.12	265.82	78.58	111.17
33	E9_Da	NovelBoundary	0	27.89	8.25	35.37	17.42	15.93	6.38	32.83
34	E9a_E10a	KnownJunction	0	92.68	113.41	210.67	133.10	311.84	95.43	108.68
35	I9	Intron	1	25.88	12.27	27.80	10.68	20.96	4.00	24.66
36	I9_AR1	ActiveIntronRegion	1	26.06	12.36	27.99	10.75	21.11	4.02	24.85
37	E10_Aa	NovelBoundary	1	43.38	25.12	35.31	12.16	25.24	4.56	48.15
38	ER10a	ExonRegion	0	121.67	133.13	232.34	158.43	277.85	83.11	120.07
39	E10_Da	NovelBoundary	0	31.91	18.15	32.97	12.03	21.44	11.87	30.17
40	E10a_E11a	KnownJunction	0	104.33	101.57	201.43	124.35	294.82	78.36	85.26
41	ER11a	ExonRegion	0	87.76	107.34	167.68	133.38	253.09	73.80	108.34
42	E11a_E12a	KnownJunction	0	100.12	103.33	207.32	135.02	301.25	89.27	109.32
43	ER12a	ExonRegion	0	93.03	110.89	183.16	155.08	200.65	94.74	128.67
44	E12a_E13a	KnownJunction	0	86.29	115.73	184.13	142.80	172.99	98.17	118.18
45	ER13a	ExonRegion	0	51.85	70.56	89.02	82.61	118.76	52.20	74.22
46	ER13b	ExonRegion	1	18.31	22.62	20.91	13.50	64.65	5.03	16.96
47	IG40	Intergenic	0	7.51	3.27	8.84	4.13	16.33	2.59	4.55
48	IG40_AR2	ActiveIntergenicRegion	0	18.85	9.02	28.25	7.57	45.73	2.89	12.51
49	IG40_AR1	ActiveIntergenicRegion	0	11.33	2.53	8.38	5.21	18.78	6.14	5.04