Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MPV17	Gene	0	76.56	47.68	61.90	43.38	109.99	40.63	125.73
2	357186	Transcript	0	2.13	2.14	3.12	1.54	6.02	0.59	3.85
3	405076	Transcript	0	0.00	2.63	1.68	1.68	0.00	0.00	1.39
4	380044	Transcript	0	0	0	0	0	0	0	0
5	399052	Transcript	0	10.53	5.68	8.62	3.46	8.68	2.95	5.31
6	402722	Transcript	0	1.67	5.60	2.45	0.73	2.69	2.09	2.62
7	405983	Transcript	0	2.06	3.22	2.40	0.89	3.24	0.49	3.90
8	233545	Transcript	0	1.25	2.46	0.54	0.00	0.00	0.92	2.16
9	403262	Transcript	0	0.63	2.12	1.22	0.26	1.73	0.00	0.28
10	402310	Transcript	0	0.63	4.10	1.74	1.46	3.11	2.25	4.11
11	ER1a	ExonRegion	0	4.26	4.29	6.24	3.09	12.04	1.18	7.70
12	E1a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	1.41	0.00	1.81	0.83	0.00	0.00	1.35
14	ER2b	ExonRegion	0	5.23	3.64	4.36	3.43	2.53	2.30	5.19
15	E2a_E3c	KnownJunction	0	133.47	53.94	95.56	62.93	346.88	60.09	202.20
16	E2a_E6b	NovelJunction	0	1.64	4.83	5.99	11.59	4.15	10.80	0.00
17	E2a_E7a	NovelJunction	1	0.67	0.00	2.05	9.51	0.00	3.22	1.38
18	ER2c	ExonRegion	0	42.01	16.60	36.16	20.92	82.11	22.34	55.24
19	ER2d	ExonRegion	0	104.02	45.50	75.13	49.99	256.87	47.03	163.68
20	ER3a	ExonRegion	0	1.25	2.46	0.54	0.00	0.00	0.92	2.16
21	E3_Ab	KnownBoundary	0	3.82	1.37	1.44	0.00	0.00	0.00	2.42
22	E3_Ac	KnownBoundary	0	1.00	4.60	0.88	0.00	0.92	1.66	1.29
23	ER3b	ExonRegion	0	38.68	21.06	28.45	17.46	92.59	17.98	62.74
24	ER3c	ExonRegion	0	97.26	54.73	72.79	49.09	159.64	46.14	170.94
25	E3a_E4a	KnownJunction	0	0.65	2.73	2.44	1.03	1.18	1.47	1.78
26	E3a_E6a	KnownJunction	0	0.00	0.00	0.69	0.00	0.00	0.00	0.56
27	E3a_E6b	KnownJunction	0	20.23	19.41	16.51	15.79	24.37	10.32	41.60
28	E3a_E6c	KnownJunction	0	2.30	5.44	3.28	1.46	3.30	2.68	3.77
29	I3_AR1	ActiveIntronRegion	1	18.97	10.32	13.90	1.47	16.37	0.15	9.86
30	ER4a	ExonRegion	0	11.20	10.18	12.33	5.71	8.02	6.23	7.79
31	E4a_E5a	KnownJunction	0	11.10	2.55	6.50	2.98	5.56	1.13	1.85
32	E4a_E6b	NovelJunction	0	1.64	7.54	0.89	1.14	3.07	9.89	3.12
33	ER5a	ExonRegion	1	19.19	7.26	13.20	4.13	19.99	2.99	9.82
34	E5_Da	NovelBoundary	0	1258.59	920.47	888.62	694.43	357.30	619.99	514.73
35	ER6a	ExonRegion	0	4.13	6.44	4.11	1.79	6.48	0.99	7.24
36	E6_Ab	KnownBoundary	0	8.24	10.85	4.77	2.87	11.92	1.50	10.45
37	ER6b	ExonRegion	0	21.63	47.00	19.20	27.22	33.30	18.67	49.61
38	E6_Ac	KnownBoundary	0	24.77	55.75	21.00	32.18	27.94	26.32	58.07
39	ER6c	ExonRegion	0	104.87	84.71	86.21	65.76	84.12	63.22	175.66
40	E6a_E7a	KnownJunction	0	241.27	91.90	191.33	101.54	190.19	75.33	347.04
41	E6a_E9a	KnownJunction	0	0.00	2.63	1.68	1.68	0.00	0.00	1.39
42	ER7a	ExonRegion	0	261.08	124.88	226.26	130.62	362.13	118.38	404.31
43	E7a_E8a	KnownJunction	0	243.07	118.35	237.40	143.37	275.64	154.96	403.93
44	ER8a	ExonRegion	0	238.33	140.66	206.23	127.31	278.62	153.52	391.00
45	E8_Da	NovelBoundary	0	13.03	10.09	23.70	21.70	7.58	14.10	9.60
46	E8a_E9a	KnownJunction	0	185.31	115.67	143.00	97.28	320.73	118.43	345.67
47	E8a_E10a	NovelJunction	0	0.68	2.78	0.89	5.74	10.42	8.09	0.00
48	E8a_E12a	KnownJunction	0	1.03	5.75	1.62	0.00	2.07	1.50	1.48
49	ER9a	ExonRegion	0	318.16	171.00	256.34	127.38	349.63	155.29	522.24
50	E9a_E10a	KnownJunction	0	290.15	143.13	231.82	106.31	356.54	124.32	418.66
51	E9a_E12a	KnownJunction	0	0.63	4.10	1.74	1.46	3.11	2.25	4.11
52	ER10a	ExonRegion	0	295.15	161.07	260.26	135.87	401.12	173.95	503.68
53	E10a_E11a	KnownJunction	0	0.00	1.34	0.00	0.00	1.06	0.00	0.00
54	E10a_E12a	KnownJunction	0	215.02	142.52	197.59	126.52	468.11	167.55	398.93
55	ER11a	ExonRegion	0	1.27	2.89	2.44	0.52	2.41	0.00	0.56
56	E12_Aa	NovelBoundary	1	2.52	13.42	0.00	1.68	8.58	1.18	0.89
57	ER12a	ExonRegion	0	368.06	222.19	262.95	212.35	535.20	191.20	615.26
58	E12_Da	KnownBoundary	0	272.23	208.94	192.92	173.00	279.54	143.59	478.44
59	ER12b	ExonRegion	0	300.69	230.66	261.73	217.18	522.31	189.87	584.43
60	E12_Db	KnownBoundary	0	229.79	187.76	208.87	200.75	592.20	176.40	440.92
61	ER12c	ExonRegion	0	105.80	89.60	97.27	91.93	185.99	80.13	199.12
62	E12_Dc	KnownBoundary	0	58.80	36.54	57.85	41.45	93.89	27.34	89.97
63	ER12d	ExonRegion	0	33.43	21.83	36.79	25.98	59.73	13.69	53.24
64	ER12e	ExonRegion	0	10.37	4.25	7.45	6.86	14.98	2.45	8.43
65	IG38	Intergenic	0	3.26	8.52	2.47	3.23	2.30	5.40	4.28
66	IG38_AR2	ActiveIntergenicRegion	0	4.17	10.26	3.11	3.32	2.97	7.36	5.32
67	IG38_AR1	ActiveIntergenicRegion	0	2.02	7.53	1.34	4.60	1.39	2.91	2.67