Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CAD	Gene	0	58.28	29.57	114.22	38.82	375.91	14.51	119.81
2	264705	Transcript	0	31.31	13.49	78.19	21.59	209.24	5.78	60.90
3	403525	Transcript	1	0.00	1.29	0.00	4.88	12.75	1.23	21.18
4	ER1a	ExonRegion	0	2.43	2.11	2.50	2.56	13.68	0.65	1.53
5	ER1b	ExonRegion	0	9.35	7.30	14.17	10.56	36.16	4.00	20.91
6	E1a_E2a	KnownJunction	0	25.69	7.30	40.90	14.49	84.88	6.59	41.86
7	ER2a	ExonRegion	0	28.84	17.09	53.60	25.07	153.41	6.58	61.55
8	E2a_E3a	KnownJunction	1	30.63	19.36	67.15	27.20	158.65	2.71	59.13
9	ER3a	ExonRegion	0	30.09	16.25	57.65	29.12	123.50	10.62	62.18
10	E3a_E4a	KnownJunction	0	22.01	21.52	46.17	35.38	127.41	11.71	49.96
11	ER4a	ExonRegion	0	31.59	17.18	72.42	31.34	193.70	11.00	60.98
12	E4a_E5a	KnownJunction	0	25.27	25.75	82.87	30.97	190.26	9.62	61.94
13	ER5a	ExonRegion	0	34.32	23.74	77.28	33.60	184.18	10.86	74.36
14	E5a_E6a	KnownJunction	1	34.46	27.64	76.21	29.69	186.64	5.28	72.73
15	ER6a	ExonRegion	0	41.88	24.10	97.88	38.24	234.26	7.83	91.66
16	E6a_E7a	KnownJunction	1	32.76	28.43	96.42	52.96	226.59	7.96	82.25
17	ER7a	ExonRegion	0	44.74	31.26	106.79	31.70	224.59	13.19	96.51
18	E7a_E8a	KnownJunction	0	33.46	22.07	86.12	30.31	209.32	16.32	82.91
19	ER8a	ExonRegion	0	30.94	28.98	88.05	21.43	188.75	13.64	78.31
20	E8a_E9a	KnownJunction	0	44.21	18.97	127.34	32.16	184.65	19.46	82.58
21	ER9a	ExonRegion	0	49.01	19.10	111.45	20.74	163.27	11.10	75.17
22	E9a_E10a	KnownJunction	0	50.55	25.27	109.37	25.14	169.76	17.10	74.32
23	ER10a	ExonRegion	0	86.73	33.68	141.52	33.82	251.20	14.02	98.05
24	E10a_E11a	KnownJunction	0	84.13	36.81	132.37	32.59	297.66	15.92	106.31
25	ER11a	ExonRegion	0	71.86	18.90	90.41	19.64	231.06	7.61	66.01
26	E11a_E12a	KnownJunction	0	57.16	20.73	78.20	26.85	193.14	5.36	56.04
27	ER12a	ExonRegion	0	42.70	13.81	89.33	24.59	247.33	9.58	83.42
28	E12a_E13a	KnownJunction	0	46.98	10.82	117.03	24.84	334.89	4.98	95.76
29	E12a_E14a	KnownJunction	1	0.00	1.29	0.00	4.88	12.75	1.23	21.18
30	ER13a	ExonRegion	0	48.79	24.37	121.11	32.96	332.55	10.94	106.21
31	E13a_E14a	KnownJunction	0	57.58	28.92	148.29	45.08	352.92	12.35	98.97
32	ER14a	ExonRegion	0	50.07	26.36	126.91	47.21	385.09	16.40	132.62
33	E14a_E15a	KnownJunction	0	66.63	18.05	117.06	41.88	402.18	12.70	131.00
34	ER15a	ExonRegion	0	59.50	23.82	133.58	45.82	428.62	15.04	146.23
35	E15_Da	NovelBoundary	1	20.45	2.44	56.45	1.54	3.27	1.18	1.66
36	E15a_E16a	KnownJunction	0	61.12	17.16	137.71	40.15	475.05	15.62	153.73
37	ER16a	ExonRegion	0	67.53	29.74	138.18	37.64	418.74	10.04	151.38
38	E16a_E17a	KnownJunction	0	73.74	28.06	154.58	38.90	341.87	7.45	150.16
39	ER17a	ExonRegion	0	63.70	31.00	127.37	40.43	427.12	11.31	151.55
40	E17a_E18a	KnownJunction	0	57.18	17.58	91.01	28.69	386.76	12.62	120.51
41	ER18a	ExonRegion	0	70.16	31.87	140.56	45.15	513.59	15.94	160.33
42	E18a_E19a	KnownJunction	0	80.33	28.40	162.36	52.45	601.96	13.45	195.29
43	ER19a	ExonRegion	0	73.20	37.98	184.39	50.50	526.10	21.30	196.51
44	E19a_E20a	KnownJunction	0	60.42	36.94	156.69	37.22	427.38	17.29	157.80
45	ER20a	ExonRegion	0	43.70	23.76	124.78	37.59	401.81	14.06	133.66
46	E20a_E21a	KnownJunction	0	32.41	17.42	96.21	34.57	382.93	10.91	100.84
47	ER21a	ExonRegion	0	42.53	25.93	117.24	36.98	386.61	10.24	139.41
48	E21a_E22a	KnownJunction	0	40.67	40.17	102.30	31.78	355.98	9.03	108.60
49	ER22a	ExonRegion	0	55.28	34.64	126.21	43.92	474.84	8.50	170.79
50	E22a_E23a	KnownJunction	1	52.86	37.33	118.43	36.79	441.32	5.95	150.32
51	ER23a	ExonRegion	1	58.64	40.63	113.27	52.41	419.06	7.01	132.73
52	E23a_E24a	KnownJunction	0	61.45	21.07	111.97	44.21	423.46	10.21	106.21
53	ER24a	ExonRegion	0	57.05	27.92	109.25	44.72	359.13	11.78	110.09
54	E24a_E25a	KnownJunction	0	48.97	19.97	110.46	37.49	340.26	14.02	118.54
55	ER25a	ExonRegion	0	51.32	24.59	107.37	39.50	283.69	11.44	111.78
56	E25a_E26a	KnownJunction	0	55.34	40.80	106.34	31.32	245.42	23.69	125.04
57	ER26a	ExonRegion	0	56.08	35.05	113.12	33.02	309.21	12.47	113.50
58	E26a_E27a	KnownJunction	0	66.79	39.04	114.59	34.43	224.81	10.61	99.13
59	ER27a	ExonRegion	0	64.76	36.62	109.91	34.52	278.09	15.71	115.73
60	E27a_E28a	KnownJunction	0	50.47	28.69	92.83	24.87	241.87	18.28	94.33
61	ER28a	ExonRegion	0	45.71	25.32	107.62	32.13	293.91	18.32	105.73
62	E28a_E29a	KnownJunction	0	31.46	20.99	80.34	24.27	233.53	14.23	93.67
63	ER29a	ExonRegion	0	39.59	24.10	97.28	24.31	285.79	16.00	111.52
64	E29a_E30a	KnownJunction	1	32.04	31.03	96.60	31.18	274.12	15.57	141.34
65	ER30a	ExonRegion	0	33.52	27.99	83.76	27.22	297.48	14.78	110.33
66	E30a_E31a	KnownJunction	0	41.69	27.61	122.06	35.35	402.80	27.79	134.84
67	ER31a	ExonRegion	0	47.49	36.56	115.86	43.71	376.92	19.19	127.15
68	E31a_E32a	KnownJunction	0	67.86	44.50	150.63	48.30	534.02	18.28	130.43
69	ER32a	ExonRegion	0	116.25	44.92	173.36	53.90	587.09	24.27	141.51
70	E32a_E33a	KnownJunction	0	204.57	65.39	269.73	73.47	1065.34	42.24	209.24
71	ER33a	ExonRegion	0	217.82	57.81	286.41	84.45	833.13	27.35	210.23
72	E33a_E34a	KnownJunction	0	166.93	34.00	196.46	59.60	821.86	20.34	150.71
73	E33a_E35a	NovelJunction	0	5.11	5.49	15.72	11.49	14.62	12.35	22.11
74	E34_Aa	NovelBoundary	1	50.24	0.00	61.84	0.00	0.00	0.00	1.55
75	ER34a	ExonRegion	0	129.95	31.96	175.99	49.82	772.33	16.49	145.92
76	E34a_E35a	KnownJunction	0	96.40	31.29	188.71	42.37	867.32	15.52	140.82
77	ER35a	ExonRegion	0	68.63	29.12	140.62	44.53	419.43	14.99	130.04
78	E35a_E36a	KnownJunction	0	36.62	22.41	78.48	43.54	303.01	13.99	104.39
79	ER36a	ExonRegion	0	55.89	32.72	116.31	50.54	394.58	12.07	117.87
80	E36a_E37a	KnownJunction	1	65.06	39.85	140.47	51.09	562.56	8.52	117.47
81	ER37a	ExonRegion	0	68.70	43.21	150.01	61.72	547.89	17.17	165.42
82	E37a_E38a	KnownJunction	0	81.85	53.02	176.34	65.24	854.52	25.62	190.99
83	ER38a	ExonRegion	0	79.00	50.89	166.61	61.40	653.91	23.56	195.92
84	E38a_E39a	KnownJunction	0	64.16	43.72	141.56	61.44	609.93	22.70	190.39
85	ER39a	ExonRegion	0	65.78	40.30	125.26	46.16	604.15	24.71	158.82
86	E39a_E40a	KnownJunction	0	82.58	53.46	117.16	35.87	463.25	17.10	150.48
87	ER40a	ExonRegion	0	74.04	46.68	108.71	45.49	460.20	21.83	155.15
88	E40a_E41a	KnownJunction	0	71.95	50.07	113.94	46.62	998.21	17.90	187.18
89	ER41a	ExonRegion	0	83.46	47.78	144.74	50.31	861.54	24.36	219.16
90	E41a_E42a	KnownJunction	0	59.10	56.46	120.87	50.15	379.31	21.52	162.13
91	ER42a	ExonRegion	0	83.49	50.76	143.94	63.29	757.46	32.51	206.29
92	E42a_E43a	KnownJunction	0	129.70	56.14	204.76	85.09	2160.54	33.04	270.52
93	ER43a	ExonRegion	0	68.83	44.37	130.71	74.92	763.49	25.18	166.43
94	E43a_E44a	KnownJunction	0	59.67	39.14	133.97	66.37	460.04	36.13	141.58
95	ER44a	ExonRegion	0	35.28	18.67	62.67	31.22	230.27	17.33	65.98
96	ER44b	ExonRegion	0	0.77	1.21	2.03	2.49	12.15	0.00	2.02
97	IG35_AR3	ActiveIntergenicRegion	0	0.81	1.64	0.80	0.76	14.62	0.30	0.17