Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AGBL5	Gene	0	26.02	69.06	24.85	67.11	150.64	65.79	88.61
2	360131	Transcript	1	1.87	3.53	2.08	0.62	6.63	9.31	2.95
3	323064	Transcript	0	1.67	6.60	3.94	12.33	15.98	7.64	10.03
4	359582	Transcript	0	3.92	8.06	6.52	10.46	8.08	11.35	3.92
5	IG25	Intergenic	0	4.76	11.73	4.59	11.55	2.72	18.95	6.53
6	IG25_SR1	SilentIntergenicRegion	0	13.03	34.08	11.14	34.19	4.49	43.19	14.40
7	IG25_AR1	ActiveIntergenicRegion	0	10.52	42.13	7.91	37.54	6.40	73.11	16.41
8	IG25_SR2	SilentIntergenicRegion	0	4.62	9.38	5.83	10.38	4.09	20.68	8.39
9	IG25_AR4	ActiveIntergenicRegion	0	3.11	9.03	0.68	5.86	1.23	6.56	0.67
10	ER1a	ExonRegion	0	0.34	1.43	0.01	0.07	1.07	0.85	0.89
11	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	1.01	0.00	0.00
12	E1_Ac	KnownBoundary	0	2.05	2.73	1.28	0.00	5.99	0.00	2.85
13	ER1b	ExonRegion	0	4.61	5.67	3.39	4.99	27.00	1.23	6.52
14	ER1c	ExonRegion	0	5.41	4.44	5.56	7.35	33.21	5.63	16.18
15	E1a_E2a	KnownJunction	1	0.83	2.71	0.00	5.61	18.00	4.90	17.67
16	ER2a	ExonRegion	0	26.34	43.46	27.84	44.08	139.63	42.54	90.41
17	E2a_E3a	KnownJunction	0	27.49	75.32	28.51	54.53	198.42	65.31	97.21
18	ER3a	ExonRegion	0	51.39	75.62	43.88	51.45	283.20	59.56	164.23
19	E3a_E4a	KnownJunction	0	26.20	57.72	23.78	46.35	198.46	31.03	88.65
20	ER4a	ExonRegion	0	30.86	56.94	22.82	36.39	223.61	38.48	105.50
21	E4a_E5a	KnownJunction	0	19.86	37.36	19.21	22.43	186.38	38.11	84.15
22	ER5a	ExonRegion	0	24.57	56.48	26.20	42.16	174.35	47.72	90.33
23	E5a_E6a	KnownJunction	0	28.77	60.66	28.55	39.17	200.14	38.65	97.91
24	ER6a	ExonRegion	0	30.10	53.32	33.65	50.06	206.89	56.20	125.41
25	E6a_E7a	KnownJunction	0	30.21	41.61	30.97	33.76	201.62	44.68	114.52
26	ER7a	ExonRegion	0	37.68	58.38	35.32	60.65	310.79	53.72	158.59
27	E7_Da	NovelBoundary	1	16.01	4.02	13.58	11.11	7.45	5.71	0.59
28	E7a_E8a	KnownJunction	0	37.64	34.23	37.10	47.27	298.86	37.39	126.75
29	E8_Aa	NovelBoundary	1	14.64	18.36	9.94	23.22	9.75	11.04	3.73
30	ER8a	ExonRegion	0	35.94	38.88	35.77	55.62	242.66	37.68	110.00
31	E8a_E9a	KnownJunction	0	21.58	31.18	21.91	21.75	243.46	20.61	79.42
32	ER9a	ExonRegion	0	26.01	29.00	19.28	36.97	182.54	31.64	72.54
33	E9a_E10a	KnownJunction	0	26.70	19.39	19.33	21.73	162.25	34.89	86.55
34	E10_Aa	NovelBoundary	1	0.73	5.20	1.71	21.92	5.56	8.33	7.47
35	ER10a	ExonRegion	0	31.34	38.62	23.18	44.46	190.33	37.32	101.40
36	E10_Da	NovelBoundary	0	9.45	19.41	2.46	14.17	4.96	11.04	8.08
37	E10a_E11a	KnownJunction	0	16.59	15.34	13.36	29.77	167.87	21.41	69.85
38	ER11a	ExonRegion	0	13.38	20.91	14.29	30.27	85.72	33.40	45.97
39	E11_Da	KnownBoundary	0	1.62	4.23	3.02	9.43	16.83	8.33	10.25
40	E11a_E12a	KnownJunction	1	14.37	9.30	7.98	6.07	21.05	29.94	5.62
41	ER11b	ExonRegion	0	1.67	6.60	3.94	12.33	15.98	7.64	10.03
42	I11	Intron	0	5.13	14.21	5.51	10.48	9.41	8.74	9.32
43	I11_AR1	ActiveIntronRegion	0	3.45	15.38	5.24	12.63	4.49	14.15	5.42
44	I11_AR2	ActiveIntronRegion	0	4.61	15.30	7.81	13.39	12.01	8.45	14.43
45	I11_SR3	SilentIntronRegion	0	6.45	16.39	5.70	13.14	10.48	11.16	12.10
46	I11_AR5	ActiveIntronRegion	0	6.08	17.46	8.74	7.69	15.19	12.60	11.71
47	ER12a	ExonRegion	0	12.10	21.97	7.56	18.53	39.14	32.08	8.02
48	E12_Da	NovelBoundary	0	9.41	11.85	6.02	21.08	15.63	12.84	10.63
49	E12a_E13a	KnownJunction	0	6.59	19.78	8.64	24.95	48.39	38.03	7.15
50	I12	Intron	0	6.96	15.24	6.69	12.42	13.50	9.54	7.73
51	I12_AR1	ActiveIntronRegion	0	7.69	16.85	7.35	13.73	14.10	10.55	8.55
52	E13_Aa	NovelBoundary	0	11.22	24.17	5.20	31.62	9.82	15.89	16.18
53	ER13a	ExonRegion	0	11.72	26.96	13.24	24.27	47.40	38.72	15.10
54	E13_Da	NovelBoundary	0	6.18	31.24	10.58	17.23	13.74	18.60	9.57
55	E13a_E14a	KnownJunction	0	5.84	10.19	8.65	15.74	7.49	20.34	3.21
56	E13a_E15a	KnownJunction	1	3.40	5.62	4.15	1.16	12.19	17.77	5.02
57	E13a_E16a	NovelJunction	0	0.62	2.44	0.53	9.51	6.43	2.09	0.00
58	I13	Intron	0	5.40	20.37	6.54	15.62	12.51	15.67	11.64
59	I13_SR1	SilentIntronRegion	0	6.49	22.12	7.71	18.71	13.80	18.94	13.26
60	I13_AR1	ActiveIntronRegion	0	2.52	16.04	3.45	7.45	9.23	7.03	7.44
61	E14_Aa	NovelBoundary	0	7.83	11.48	5.82	24.76	13.32	12.73	9.97
62	ER14a	ExonRegion	0	3.86	7.88	8.23	11.46	9.34	10.96	4.23
63	E14_Da	NovelBoundary	1	1.84	28.82	12.57	10.54	11.96	8.07	11.11
64	E14a_E15a	KnownJunction	0	2.07	6.09	2.69	4.17	7.42	2.76	4.33
65	I14	Intron	0	5.31	21.01	11.98	22.54	11.20	11.89	12.72
66	I14_AR1	ActiveIntronRegion	0	5.33	21.09	12.02	22.62	11.24	11.94	12.77
67	E15_Aa	NovelBoundary	0	6.91	23.72	6.88	15.25	5.16	22.54	7.32
68	ER15a	ExonRegion	0	12.25	21.99	12.13	16.70	37.48	24.88	9.63
69	E15_Da	NovelBoundary	0	5.02	27.85	9.97	17.96	13.00	17.45	5.98
70	E15a_E16a	KnownJunction	1	15.00	2.76	9.81	14.28	47.97	14.07	7.28
71	I15	Intron	0	4.23	15.89	3.88	12.30	7.85	13.08	5.71
72	I15_AR1	ActiveIntronRegion	0	4.25	15.97	3.90	12.36	7.88	13.14	5.74
73	E16_Aa	NovelBoundary	0	3.91	10.51	7.69	20.07	7.93	21.15	6.26
74	ER16a	ExonRegion	0	30.87	232.14	32.51	224.61	67.51	216.55	105.37
75	IG26_AR1	ActiveIntergenicRegion	0	197.18	348.57	143.94	394.14	363.48	362.15	415.11
76	IG26_AR3	ActiveIntergenicRegion	0	24.03	189.72	24.87	181.21	87.30	152.26	77.64