Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CSNK1E	Gene	0	194.99	618.75	254.68	667.06	304.20	395.58	417.67
2	400206	Transcript	0	3.71	8.64	4.00	6.67	5.90	9.12	2.90
3	359867	Transcript	0	0.00	0.45	1.19	0.46	0.42	0.48	1.01
4	398519	Transcript	0	261.19	289.21	238.07	287.12	86.48	138.53	306.73
5	403904	Transcript	0	0.31	1.21	0.14	0.25	5.02	0.00	0.67
6	405675	Transcript	0	11.31	20.31	18.50	18.75	10.87	10.29	24.58
7	396832	Transcript	0	0	0	0	0	0	0	0
8	402865	Transcript	0	1.02	0.00	0.00	3.36	0.00	4.98	1.78
9	ER1a	ExonRegion	0	1.65	0.87	0.88	0.32	0.36	1.17	0.00
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	2.18	7.83	1.20	3.39	1.09	5.34	0.44
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	13.86	16.90	13.21	16.46	20.41	20.25	8.05
14	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	9.67	16.36	10.62	15.36	14.52	17.98	5.98
16	E4a_E5a	KnownJunction	0	0.93	11.64	4.37	13.41	8.92	20.48	5.72
17	ER5a	ExonRegion	0	7.18	17.29	6.41	11.83	8.43	13.73	5.58
18	E5a_E8a	KnownJunction	0	1.65	15.53	3.35	5.96	5.26	12.30	3.25
19	ER6a	ExonRegion	0	0.00	0.90	2.39	0.92	0.83	0.97	2.02
20	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER7b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER7c	ExonRegion	0	0.15	9.53	0.22	10.55	0.32	5.39	0.34
24	E7_Ad	KnownBoundary	0	4.91	98.54	8.65	95.74	4.86	41.43	20.39
25	ER7d	ExonRegion	0	14.06	201.26	22.46	186.79	31.59	89.10	44.63
26	E7a_E8a	KnownJunction	0	57.66	470.94	90.07	371.69	122.39	185.27	177.04
27	ER8a	ExonRegion	0	149.54	861.98	239.36	807.12	339.22	495.61	442.98
28	E8a_E9a	KnownJunction	0	256.44	1238.80	400.70	1152.40	542.59	682.88	733.81
29	ER9a	ExonRegion	0	315.43	1773.44	484.79	1654.54	522.49	992.90	1041.09
30	E9a_E10a	KnownJunction	0	298.93	1899.32	449.10	1847.83	645.30	1113.56	1064.29
31	ER10a	ExonRegion	0	493.06	2160.27	762.19	2246.52	1028.94	1321.91	1550.19
32	E10a_E11a	KnownJunction	0	543.89	2198.18	794.55	2287.25	1020.46	1343.77	1504.84
33	ER11a	ExonRegion	0	505.60	1768.47	712.28	1911.15	932.06	1103.37	1353.47
34	E11a_E12a	KnownJunction	0	524.60	1685.37	737.16	1863.60	962.20	1035.60	1404.82
35	ER12a	ExonRegion	0	535.31	1816.57	783.79	1996.55	886.76	1100.81	1448.42
36	E12a_E13a	KnownJunction	0	531.44	1843.60	827.57	2123.29	786.70	1148.75	1643.90
37	ER13a	ExonRegion	0	389.80	1461.55	569.68	1573.98	818.26	841.68	1072.55
38	E13_Da	NovelBoundary	0	85.69	135.46	109.47	117.11	27.29	29.10	81.47
39	E13a_E14a	KnownJunction	0	111.26	167.22	118.63	127.44	46.94	94.60	183.23
40	E13a_E14b	KnownJunction	0	20.31	33.34	35.64	33.76	19.32	19.35	48.48
41	E13a_E15a	KnownJunction	0	96.07	757.80	209.13	904.08	429.06	473.63	290.58
42	I13	Intron	1	102.65	136.08	114.37	151.04	22.55	43.56	127.89
43	I13_AR1	ActiveIntronRegion	1	102.77	136.24	114.49	151.21	22.57	43.61	128.03
44	E14_Aa	NovelBoundary	0	216.25	233.42	293.18	319.97	47.60	98.33	290.40
45	ER14a	ExonRegion	0	411.12	411.21	357.51	446.81	126.02	182.46	430.23
46	E14_Ab	KnownBoundary	0	332.48	478.80	310.50	504.25	85.73	203.62	502.14
47	ER14b	ExonRegion	0	133.65	259.00	134.27	302.81	57.58	120.85	240.17
48	ER14c	ExonRegion	0	2.31	7.29	1.35	3.74	2.43	1.23	0.67
49	ER15a	ExonRegion	0	64.04	605.33	125.78	697.70	272.04	388.18	197.60
50	E15a_E16a	KnownJunction	0	96.84	616.49	196.27	706.29	224.65	422.23	226.91
51	ER16a	ExonRegion	0	131.82	673.10	244.91	717.65	289.46	457.26	277.79
52	E16a_E17a	KnownJunction	0	111.72	621.98	210.99	733.57	324.28	451.07	282.87
53	ER17a	ExonRegion	0	170.78	594.31	325.49	681.05	430.58	444.28	293.66
54	E17a_E18a	KnownJunction	0	214.30	461.72	356.50	512.27	369.91	393.93	232.84
55	ER17b	ExonRegion	0	0.31	1.21	0.14	0.25	5.02	0.00	0.67
56	ER18a	ExonRegion	0	208.25	689.96	284.94	768.47	480.48	539.13	391.48
57	E18_Da	KnownBoundary	1	93.08	550.75	130.61	605.38	366.84	432.90	294.74
58	E18a_E18b	KnownJunction	0	1.02	0.00	0.00	3.36	0.00	4.98	1.78
59	ER18b	ExonRegion	0	67.03	418.83	83.75	485.17	188.29	355.79	139.49
60	E18_Db	KnownBoundary	0	20.73	358.71	25.03	453.51	91.82	314.66	37.59
61	ER18c	ExonRegion	0	92.43	392.59	124.40	461.47	249.15	349.32	177.53
62	E18_Ab	KnownBoundary	0	117.78	369.72	155.86	349.15	183.57	360.54	221.99
63	ER18d	ExonRegion	0	55.19	206.24	95.66	212.36	167.79	226.65	83.35
64	E18_Dc	KnownBoundary	0	34.06	102.20	58.56	115.41	81.56	127.54	34.42
65	ER18e	ExonRegion	0	18.48	77.07	42.62	71.90	25.14	85.99	26.18
66	IG16	Intergenic	0	4.13	6.41	4.79	9.54	7.65	6.64	9.37
67	IG16_SR3	SilentIntergenicRegion	0	2.73	4.77	3.32	5.28	6.26	4.12	7.77
68	IG16_AR4	ActiveIntergenicRegion	0	8.69	10.97	12.79	21.58	16.32	10.90	20.34
69	IG16_SR2	SilentIntergenicRegion	0	4.84	7.49	4.87	12.01	8.26	8.34	9.65
70	IG16_AR3	ActiveIntergenicRegion	0	2.31	7.29	5.42	12.26	0.00	11.85	1.35
71	IG16_SR1	SilentIntergenicRegion	0	3.69	5.57	4.14	6.58	0.36	8.79	3.76