Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PPARA	Gene	0	25.50	18.77	22.00	15.68	13.26	29.50	30.88
2	262735	Transcript	0	1.79	4.91	1.84	0.47	0.85	7.39	2.19
3	406390	Transcript	0	0.72	3.64	0.34	1.08	4.86	0.99	1.75
4	407236	Transcript	0	0.92	1.94	0.68	0.25	1.62	2.21	0.40
5	402126	Transcript	0	2.79	7.80	2.69	2.61	0.81	5.04	1.56
6	396000	Transcript	0	0.51	6.07	2.26	1.25	1.35	5.72	2.25
7	ER1a	ExonRegion	0	1.01	1.75	1.19	0.00	0.33	3.76	0.25
8	E1a_E3b	KnownJunction	1	4.36	7.38	3.66	1.41	1.18	11.74	4.23
9	ER2a	ExonRegion	0	0.67	1.95	0.15	0.63	2.18	0.80	0.47
10	E2a_E3b	KnownJunction	0	0.00	5.86	0.00	1.49	3.99	0.00	0.70
11	ER3a	ExonRegion	0	0.92	1.94	0.68	0.25	1.62	2.21	0.40
12	ER3b	ExonRegion	1	8.14	23.78	8.02	2.55	3.39	17.09	4.22
13	E3a_E4b	KnownJunction	1	2.19	18.60	5.17	3.17	3.41	13.51	1.69
14	E3a_E5b	KnownJunction	0	0.00	5.60	0.66	0.00	1.06	6.67	2.11
15	E4_Aa	NovelBoundary	0	10.90	1.16	9.54	0.00	3.07	4.74	4.80
16	E4_Ab	NovelBoundary	0	29.54	10.69	21.53	9.05	0.00	20.48	23.23
17	ER4a	ExonRegion	0	0.38	3.85	0.90	0.83	0.54	2.45	0.45
18	ER4b	ExonRegion	1	6.14	25.10	4.99	5.35	5.53	13.93	5.94
19	E4a_E5b	KnownJunction	0	2.14	6.91	2.04	1.14	2.10	5.79	4.24
20	E4a_E5c	KnownJunction	0	5.19	11.74	4.48	4.39	1.08	7.64	2.68
21	ER5a	ExonRegion	0	0.51	6.07	2.26	1.25	1.35	5.72	2.25
22	ER5b	ExonRegion	1	4.87	27.13	7.68	7.07	5.94	23.29	8.99
23	ER5c	ExonRegion	0	15.03	30.29	18.27	17.99	11.51	40.99	23.92
24	E5a_E6a	KnownJunction	0	14.92	19.73	21.68	27.17	20.31	53.76	31.83
25	ER6a	ExonRegion	0	20.85	24.35	21.31	15.11	18.25	34.46	33.16
26	E6_Da	NovelBoundary	0	3.64	16.79	7.24	11.87	3.20	24.52	0.60
27	E6a_E7a	KnownJunction	0	30.59	22.80	20.58	12.76	17.40	21.71	34.28
28	I6_AR1	ActiveIntronRegion	0	4.35	7.65	4.58	1.66	1.46	3.56	0.67
29	ER7a	ExonRegion	0	31.62	23.59	22.69	15.21	21.65	31.65	39.06
30	E7a_E8a	KnownJunction	0	16.34	14.53	14.04	12.95	18.03	22.38	26.87
31	ER8a	ExonRegion	0	17.80	19.60	17.04	10.32	18.42	24.07	33.29
32	E8_Da	KnownBoundary	0	4.09	5.10	1.64	1.41	18.74	4.45	6.85
33	E8a_E9a	KnownJunction	0	8.33	14.71	15.85	8.72	6.34	21.28	20.22
34	ER8b	ExonRegion	0	1.50	3.09	0.86	1.11	8.41	2.17	4.07
35	E8_Db	NovelBoundary	1	2.77	8.20	2.96	3.36	8.41	6.11	12.60
36	I8_SR1	SilentIntronRegion	0	2.45	3.67	1.66	0.54	11.72	3.13	4.96
37	I8_AR2	ActiveIntronRegion	0	3.70	2.97	1.73	2.57	5.51	9.85	3.84
38	ER9a	ExonRegion	0	39.82	28.77	25.37	23.68	14.50	33.65	37.73
39	E9a_E10a	KnownJunction	0	19.58	12.58	18.47	11.68	7.86	15.84	26.73
40	ER10a	ExonRegion	0	29.25	26.85	20.94	17.85	12.14	29.57	40.30
41	E10_Da	KnownBoundary	0	28.51	18.36	16.12	17.66	16.44	35.16	36.26
42	ER10b	ExonRegion	0	26.90	18.28	23.66	16.38	13.72	30.86	32.44
43	ER10c	ExonRegion	0	0.77	1.21	0.00	0.00	0.00	0.00	0.00