Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FAM118A	Gene	0	12.46	25.38	35.50	49.28	35.42	34.43	41.57
2	216214	Transcript	0	7.26	9.00	16.19	19.25	17.90	15.50	16.27
3	405548	Transcript	0	0.92	3.31	1.46	5.76	1.17	3.83	3.05
4	405673	Transcript	1	5.79	15.03	24.98	20.09	12.06	5.36	15.85
5	ER1a	ExonRegion	0	0.52	0.28	1.77	1.71	0.37	0.00	0.00
6	E1a_E2b	KnownJunction	0	2.35	0.00	0.00	3.36	0.00	0.00	0.00
7	ER2a	ExonRegion	0	0.92	3.31	1.46	5.76	1.17	3.83	3.05
8	E2_Ab	KnownBoundary	1	2.60	10.38	5.62	16.04	3.71	8.31	13.41
9	ER2b	ExonRegion	0	3.26	9.05	6.15	14.12	3.49	5.73	6.98
10	E2_Ac	KnownBoundary	0	3.59	18.65	6.52	23.16	11.96	9.33	7.44
11	ER2c	ExonRegion	0	8.50	15.67	20.78	35.27	18.50	21.32	22.97
12	E2a_E3a	KnownJunction	0	11.08	14.03	34.79	44.78	12.56	31.81	38.68
13	I2_AR5	ActiveIntronRegion	0	2.16	4.20	2.66	11.92	0.77	11.15	3.30
14	ER3a	ExonRegion	0	13.97	22.11	36.20	45.45	25.97	42.76	45.97
15	E3_Da	NovelBoundary	1	4.26	1.63	13.42	5.50	0.00	1.63	2.36
16	E3a_E4a	KnownJunction	0	14.82	22.23	37.13	49.63	25.70	47.89	45.79
17	ER4a	ExonRegion	0	20.20	50.86	53.59	98.17	42.79	71.42	67.68
18	E4a_E5a	KnownJunction	0	14.10	76.50	45.84	106.50	52.17	81.71	67.97
19	ER5a	ExonRegion	0	15.08	71.86	56.07	105.46	45.89	64.59	79.42
20	E5_Da	NovelBoundary	1	3.07	0.00	30.35	0.00	11.90	0.00	14.69
21	E5a_E6a	KnownJunction	1	9.06	19.55	41.24	20.18	19.43	5.41	24.29
22	E5a_E7a	KnownJunction	0	11.93	49.18	45.01	78.05	40.20	61.59	61.21
23	E6_Aa	NovelBoundary	1	1.03	17.92	8.12	18.72	10.00	5.41	6.68
24	ER6a	ExonRegion	1	2.53	10.52	8.73	20.00	4.68	5.30	7.41
25	E7_Aa	NovelBoundary	1	2.32	0.00	12.17	1.14	3.27	0.00	2.42
26	ER7a	ExonRegion	0	15.07	50.56	55.16	78.31	54.17	41.25	62.23
27	E7_Da	NovelBoundary	0	5.49	8.09	11.27	6.75	7.31	1.98	4.84
28	E7a_E8a	KnownJunction	0	16.41	61.48	74.65	91.65	77.46	42.69	73.94
29	ER8a	ExonRegion	0	41.28	58.84	111.52	124.91	98.93	77.07	103.09
30	E8a_E9a	KnownJunction	0	26.50	36.07	60.01	97.18	85.73	49.28	75.99
31	E8a_E10a	NovelJunction	0	1.03	4.68	0.76	10.13	1.18	4.42	0.00
32	I8	Intron	0	4.35	3.88	12.41	9.11	6.40	3.64	6.96
33	I8_SR1	SilentIntronRegion	0	2.93	3.47	11.97	7.02	5.17	3.38	6.89
34	I8_AR1	ActiveIntronRegion	0	6.48	4.06	15.68	11.87	8.26	4.24	8.46
35	I8_SR2	SilentIntronRegion	1	3.07	11.59	3.94	14.89	6.93	4.56	4.22
36	I8_AR2	ActiveIntronRegion	0	1.88	6.99	4.35	10.15	5.26	5.11	3.69
37	ER9a	ExonRegion	0	30.04	36.56	71.29	105.20	91.00	76.23	98.04
38	E9_Da	NovelBoundary	1	17.17	4.52	30.75	8.43	6.52	2.63	3.80
39	E9a_E10a	KnownJunction	0	24.02	27.72	60.05	72.31	79.60	70.32	83.21
40	E10_Aa	NovelBoundary	1	1.87	3.23	13.34	8.99	2.17	0.00	7.14
41	ER10a	ExonRegion	0	25.23	40.57	73.83	97.35	90.25	85.51	121.72
42	E10_Da	NovelBoundary	0	3.99	4.10	10.52	17.88	3.27	7.10	5.66
43	E10a_E11a	KnownJunction	0	18.04	36.15	60.40	80.24	82.64	47.14	110.38
44	I10_AR2	ActiveIntronRegion	0	4.29	2.90	12.39	4.78	2.47	2.17	4.77
45	I10_SR3	SilentIntronRegion	0	7.59	7.29	12.28	2.49	4.15	4.90	4.64
46	ER11a	ExonRegion	0	14.55	39.89	58.05	86.30	70.23	66.99	98.37
47	E11_Da	KnownBoundary	1	8.43	52.33	50.86	78.32	38.66	57.35	83.58
48	ER11b	ExonRegion	0	18.91	26.73	46.79	52.69	53.33	46.49	48.82
49	IG44_AR1	ActiveIntergenicRegion	0	3.37	0.37	9.48	7.07	4.96	2.53	12.08