Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TFIP11	Gene	0	53.76	95.75	91.58	78.31	75.57	100.72	106.58
2	407690	Transcript	0	3.73	3.31	10.81	6.94	8.28	1.70	5.22
3	405938	Transcript	0	9.65	10.64	8.79	4.13	6.61	3.38	7.30
4	407148	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	407431	Transcript	0	1.53	2.63	3.21	2.85	3.20	1.58	3.16
6	263115	Transcript	0	6.15	9.11	6.66	7.69	2.83	12.67	9.22
7	IG3_AR8	ActiveIntergenicRegion	0	0.63	1.93	0.92	5.12	19.22	1.01	0.56
8	IG3_AR7	ActiveIntergenicRegion	0	2.87	1.66	6.56	7.29	37.77	2.91	6.96
9	IG3_AR6	ActiveIntergenicRegion	0	1.54	0.26	4.57	3.20	22.78	1.05	4.18
10	IG3_SR2	SilentIntergenicRegion	0	1.95	0.68	2.39	2.23	14.79	0.27	2.94
11	IG3_AR1	ActiveIntergenicRegion	0	2.15	1.69	2.78	2.49	25.33	0.47	4.11
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1c	ExonRegion	1	61.87	23.53	93.35	33.35	63.66	33.99	47.76
15	E1a_E2b	KnownJunction	1	112.04	49.65	171.42	69.03	105.81	69.41	96.42
16	ER2a	ExonRegion	0	1.53	2.63	3.21	2.85	3.20	1.58	3.16
17	E2_Ab	KnownBoundary	0	2.95	5.28	1.19	4.17	1.08	2.68	8.93
18	ER2b	ExonRegion	0	34.80	37.17	59.73	45.68	33.56	52.35	52.54
19	E2a_E3a	KnownJunction	0	0.73	11.82	2.70	2.57	2.19	1.29	0.59
20	E2a_E4b	KnownJunction	1	7.64	47.34	15.18	28.82	14.66	64.88	36.43
21	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E3_Aa	NovelBoundary	1	227.95	216.87	175.78	66.70	20.72	178.11	208.52
23	ER3a	ExonRegion	0	8.58	10.97	9.91	3.87	13.48	5.30	8.70
24	E3_Da	NovelBoundary	1	20.29	13.90	16.87	22.19	0.00	9.06	6.08
25	E3a_E4b	KnownJunction	0	19.64	9.14	13.75	5.93	4.15	3.56	12.63
26	ER4a	ExonRegion	0	6.15	9.11	6.66	7.69	2.83	12.67	9.22
27	ER4b	ExonRegion	0	87.19	71.12	142.37	67.20	45.44	98.02	98.58
28	E4a_E5a	KnownJunction	0	126.53	78.79	194.49	75.42	106.14	92.38	118.69
29	ER5a	ExonRegion	0	60.85	91.59	92.90	68.75	78.04	105.09	97.63
30	E5a_E6a	KnownJunction	0	101.32	92.21	117.45	80.11	74.28	104.41	99.68
31	ER6a	ExonRegion	0	165.58	142.19	198.65	116.12	124.41	167.14	135.07
32	E6_Da	NovelBoundary	1	15.07	6.15	12.63	10.76	1.18	8.90	2.26
33	E6a_E7a	KnownJunction	0	215.82	150.14	238.69	129.28	113.72	183.61	152.79
34	ER7a	ExonRegion	0	143.72	124.85	175.58	96.82	106.55	136.19	133.93
35	E7_Da	NovelBoundary	1	37.50	2.60	38.23	3.96	1.11	0.00	0.00
36	E7a_E8a	KnownJunction	0	94.50	104.74	119.40	100.18	89.35	118.37	130.86
37	ER8a	ExonRegion	0	68.94	125.04	118.76	81.72	79.49	120.37	137.04
38	E8a_E9a	KnownJunction	0	59.25	139.08	112.66	83.60	82.78	140.54	129.91
39	ER9a	ExonRegion	0	70.64	148.87	130.04	111.97	79.24	145.82	155.89
40	E9a_E10a	KnownJunction	0	45.28	129.70	93.26	117.98	77.48	147.83	130.00
41	E10_Aa	NovelBoundary	1	19.08	5.52	37.49	8.51	1.87	0.00	0.89
42	ER10a	ExonRegion	0	43.15	127.76	81.21	87.33	73.32	126.88	129.85
43	E10a_E11a	KnownJunction	0	72.00	176.49	132.35	119.93	93.94	162.19	171.50
44	ER11a	ExonRegion	0	85.54	186.84	157.93	134.00	130.80	180.06	197.51
45	E11a_E12a	KnownJunction	0	116.78	203.00	209.03	123.05	154.43	163.05	208.92
46	I11_AR2	ActiveIntronRegion	1	4.66	10.70	17.13	19.38	13.56	5.81	10.77
47	E12_Aa	NovelBoundary	1	8.78	6.86	36.16	21.65	16.14	7.42	15.92
48	ER12a	ExonRegion	0	87.74	183.68	187.57	145.71	131.69	165.68	222.92
49	E12_Da	NovelBoundary	1	42.29	21.65	93.38	28.17	21.42	4.10	15.06
50	E12a_E13a	KnownJunction	0	77.71	125.63	148.45	103.79	146.02	113.23	195.71
51	I12	Intron	1	18.28	19.63	27.13	30.24	16.51	5.97	8.48
52	I12_AR1	ActiveIntronRegion	1	25.31	21.17	35.23	40.13	21.57	7.69	9.68
53	I12_AR2	ActiveIntronRegion	1	15.71	24.30	25.36	19.95	16.29	1.23	9.82
54	ER13a	ExonRegion	0	60.24	139.62	121.80	109.33	100.90	136.21	170.46
55	E13_Da	NovelBoundary	1	9.45	15.95	20.74	29.42	5.42	0.00	13.50
56	E13a_E14a	KnownJunction	0	83.22	163.25	175.03	112.46	166.42	171.76	218.64
57	I13	Intron	1	8.22	7.16	17.48	18.54	8.55	5.70	9.83
58	I13_AR1	ActiveIntronRegion	1	11.44	10.09	24.47	26.16	11.15	8.21	13.58
59	ER14a	ExonRegion	0	79.55	153.98	154.23	115.77	134.93	178.70	198.30
60	E14_Da	NovelBoundary	1	3.59	9.64	9.97	21.94	14.25	0.00	4.26
61	E14a_E15a	KnownJunction	0	82.63	183.03	133.26	87.26	108.39	187.81	180.95
62	E14a_E16a	NovelJunction	0	0.00	2.65	0.80	1.41	0.00	8.55	0.00
63	I14	Intron	1	6.82	9.67	24.49	21.52	27.19	5.69	12.57
64	I14_AR1	ActiveIntronRegion	1	6.87	9.73	24.65	21.66	27.36	5.73	12.65
65	E15_Aa	NovelBoundary	1	16.12	23.70	46.17	53.48	52.81	18.76	22.50
66	ER15a	ExonRegion	0	84.36	172.39	147.73	147.35	167.38	181.93	212.27
67	E15_Da	NovelBoundary	1	28.27	34.07	89.21	97.77	199.57	20.48	44.74
68	E15a_E16a	KnownJunction	0	70.28	123.90	113.09	107.44	136.47	185.32	207.45
69	I15	Intron	1	21.42	21.96	51.90	40.59	59.86	7.22	21.67
70	I15_AR1	ActiveIntronRegion	1	21.45	21.99	51.97	40.65	59.96	7.23	21.70
71	E16_Aa	NovelBoundary	1	11.68	20.86	20.81	64.23	36.68	10.61	26.21
72	ER16a	ExonRegion	0	40.83	120.75	69.54	120.96	100.53	147.87	121.92
73	E16_Da	KnownBoundary	0	27.81	88.06	56.30	91.43	66.78	76.41	59.69
74	ER16b	ExonRegion	0	34.44	61.43	62.97	86.18	100.13	56.04	47.96
75	E16_Db	KnownBoundary	0	10.21	15.84	20.78	22.57	38.48	14.07	11.28
76	E16_Dc	KnownBoundary	1	5.34	11.43	31.60	38.77	48.00	9.81	16.01
77	ER16c	ExonRegion	1	27.86	31.89	62.32	79.49	85.64	24.83	35.92
78	ER16d	ExonRegion	1	7.45	6.61	21.61	13.88	16.57	3.41	10.44