Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TRIOBP	Gene	0	28.57	49.13	27.54	35.87	60.71	27.40	73.08
2	406386	Transcript	0	0.42	1.28	0.96	0.48	48.53	0.31	2.16
3	396964	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	344404	Transcript	0	0	0	0	0	0	0	0
5	331103	Transcript	0	0	0	0	0	0	0	0
6	396963	Transcript	0	0	0	0	0	0	0	0
7	407319	Transcript	0	6.88	3.15	6.66	2.04	4.27	2.76	4.23
8	403663	Transcript	0	0	0	0	0	0	0	0
9	IG48	Intergenic	0	1.95	4.19	2.01	1.23	1.02	3.81	8.64
10	IG48_SR1	SilentIntergenicRegion	0	1.97	4.23	2.04	1.24	1.03	3.85	8.73
11	ER1a	ExonRegion	0	0.46	0.41	0.00	0.06	50.80	0.00	0.59
12	E1a_E2a	KnownJunction	0	0.00	1.58	0.00	0.00	82.21	0.00	0.00
13	ER2a	ExonRegion	0	0.45	3.14	0.00	1.87	61.12	0.00	4.68
14	E2_Ab	KnownBoundary	0	0.80	5.81	2.26	4.44	40.69	1.66	13.44
15	ER2b	ExonRegion	0	1.10	5.80	2.30	4.95	20.71	0.00	11.14
16	E2a_E3a	KnownJunction	1	0.00	8.96	2.59	6.26	14.04	0.00	9.20
17	ER3a	ExonRegion	0	0.88	5.94	3.39	3.05	66.36	1.95	12.93
18	E3a_E4a	KnownJunction	1	0.00	5.52	3.08	1.33	23.10	1.31	9.47
19	ER4a	ExonRegion	0	0.00	5.57	2.36	4.00	27.16	0.23	7.04
20	E4a_E5a	KnownJunction	0	0.00	2.50	0.89	1.14	21.99	0.00	3.50
21	ER5a	ExonRegion	0	0.58	3.08	0.80	2.28	21.50	0.46	4.65
22	E5a_E6a	KnownJunction	0	0.97	1.37	1.51	0.00	15.56	0.00	1.46
23	ER6a	ExonRegion	0	1.33	1.62	2.33	1.09	27.64	1.10	5.35
24	E6a_E7a	KnownJunction	0	0.00	2.89	2.28	0.00	27.96	0.00	5.27
25	ER7a	ExonRegion	0	2.80	9.72	4.38	3.00	83.05	4.15	15.81
26	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	1.49	5.58	0.00	0.00
27	E7a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	I7	Intron	0	0.94	1.43	0.82	0.31	29.08	0.51	5.33
29	I7_AR2	ActiveIntronRegion	0	1.53	1.49	1.21	0.77	32.96	1.23	2.90
30	I7_SR2	SilentIntronRegion	0	1.14	1.48	0.97	0.26	33.55	0.52	6.11
31	I7_AR3	ActiveIntronRegion	0	0.99	2.14	0.64	0.23	47.72	0.00	10.02
32	I7_AR4	ActiveIntronRegion	0	0.72	1.56	1.08	0.00	29.86	0.79	6.58
33	ER8a	ExonRegion	0	0.98	0.00	0.06	1.66	13.73	0.00	3.03
34	E8a_E9a	KnownJunction	0	0.00	0.00	0.59	1.57	15.38	0.00	1.78
35	ER9a	ExonRegion	0	0.00	0.00	0.68	1.25	15.12	2.04	1.57
36	ER9b	ExonRegion	0	0.55	2.40	1.47	1.91	14.33	1.05	1.84
37	E9a_E10a	KnownJunction	0	0.90	2.29	0.00	1.65	21.23	1.34	1.53
38	ER10a	ExonRegion	0	0.00	1.71	0.62	1.02	23.40	0.00	2.14
39	E10a_E11a	KnownJunction	0	0.00	1.63	0.00	1.33	5.51	0.00	0.57
40	E10a_E13a	NovelJunction	0	1.92	1.63	0.63	1.41	34.05	0.00	5.27
41	ER11a	ExonRegion	0	0.16	1.41	0.00	1.21	6.23	0.00	0.40
42	E11a_E13a	KnownJunction	0	0.85	1.52	0.00	0.00	5.28	0.00	0.00
43	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.12	0.00	0.00
44	ER12b	ExonRegion	0	0.00	0.00	0.00	0.00	0.81	0.00	0.00
45	ER12c	ExonRegion	0	2.93	16.40	4.49	10.75	4.79	6.66	15.24
46	E12a_E13a	KnownJunction	0	10.90	57.67	18.75	26.60	13.99	23.50	38.71
47	ER13a	ExonRegion	0	34.16	88.81	27.97	43.80	64.99	39.27	84.96
48	E13a_E14a	KnownJunction	0	60.57	120.48	38.63	57.81	81.15	49.90	138.14
49	ER14a	ExonRegion	0	92.08	177.89	72.25	132.04	113.92	106.13	260.68
50	E14a_E15a	KnownJunction	0	116.06	231.85	124.10	175.25	141.11	141.45	403.53
51	ER15a	ExonRegion	0	127.28	270.71	121.62	183.66	138.52	145.57	432.50
52	E15a_E16a	KnownJunction	0	127.13	259.90	90.98	177.91	138.55	132.74	336.69
53	ER16a	ExonRegion	0	135.89	235.76	123.38	191.25	152.40	136.00	408.66
54	E16a_E17a	KnownJunction	0	158.52	177.78	138.10	186.82	165.36	103.80	447.28
55	ER17a	ExonRegion	0	72.34	117.36	62.44	88.17	75.22	60.32	167.89
56	E17a_E18a	KnownJunction	0	131.88	176.91	117.66	115.62	113.95	96.05	275.94
57	ER18a	ExonRegion	0	116.77	213.84	114.24	142.28	99.76	114.11	276.47
58	E18a_E19a	KnownJunction	1	9.63	13.85	4.77	14.79	7.10	1.66	10.43
59	E18a_E20a	KnownJunction	0	92.33	206.76	97.30	155.96	107.38	120.09	247.20
60	ER19a	ExonRegion	1	10.14	12.43	10.19	9.71	7.84	1.68	9.80
61	E19_Da	KnownBoundary	1	10.33	2.50	9.47	2.63	4.26	1.31	1.52
62	ER19b	ExonRegion	0	6.88	3.15	6.66	2.04	4.27	2.76	4.23
63	E20_Aa	NovelBoundary	1	41.81	2.50	34.65	1.03	1.04	0.00	0.89
64	ER20a	ExonRegion	0	73.21	210.16	67.93	138.37	93.98	113.84	225.93
65	E20a_E21a	KnownJunction	0	45.61	220.86	57.98	144.07	77.57	108.97	225.03
66	ER21a	ExonRegion	0	103.38	224.01	97.88	155.06	142.27	117.87	306.35
67	E21_Da	NovelBoundary	1	51.61	3.97	32.30	1.44	30.82	0.00	8.44
68	E21a_E22a	KnownJunction	0	137.16	217.03	101.27	150.17	157.29	86.16	319.96
69	E21a_E23a	NovelJunction	0	1.65	1.47	3.52	2.76	2.10	1.58	12.05
70	E21a_E24a	NovelJunction	1	2.30	0.00	5.10	12.41	0.97	2.89	3.86
71	ER22a	ExonRegion	0	127.03	216.27	103.40	143.88	135.70	83.61	325.43
72	E22a_E23a	KnownJunction	0	152.68	200.32	119.99	167.69	163.05	102.64	364.78
73	ER23a	ExonRegion	0	161.30	241.37	146.37	160.71	182.83	128.40	372.76
74	E23a_E24a	KnownJunction	0	199.58	239.39	178.31	152.82	204.62	141.18	433.45
75	ER24a	ExonRegion	0	195.85	314.19	202.81	182.10	213.57	175.70	514.83
76	E24a_E25a	KnownJunction	0	176.31	299.26	196.31	210.66	247.36	192.50	512.71
77	ER25a	ExonRegion	0	208.45	303.91	195.73	222.28	292.50	196.08	617.50
78	E25_Da	NovelBoundary	1	12.73	31.92	10.38	29.94	16.83	8.63	44.11
79	E25a_E26a	KnownJunction	0	211.54	253.73	154.83	218.54	260.89	174.87	642.26
80	I25	Intron	1	12.09	31.69	15.26	20.10	26.70	10.74	37.50
81	I25_AR1	ActiveIntronRegion	1	5.86	30.42	11.85	19.52	19.26	5.96	35.98
82	I25_AR2	ActiveIntronRegion	0	18.83	33.29	19.01	20.87	34.84	15.91	39.40
83	E26_Aa	NovelBoundary	1	9.08	54.30	16.64	28.85	21.23	31.03	70.91
84	ER26a	ExonRegion	0	99.49	126.80	75.53	97.58	124.98	85.76	227.16
85	E26_Da	KnownBoundary	0	51.20	38.75	57.12	34.11	64.27	41.57	112.66
86	ER26b	ExonRegion	0	27.23	43.34	30.46	41.24	29.17	28.25	53.22
87	ER26c	ExonRegion	0	0.77	0.00	3.84	0.00	0.00	1.23	3.37
88	IG49	Intergenic	0	4.32	6.66	4.83	6.54	2.39	4.28	8.44
89	IG49_SR1	SilentIntergenicRegion	0	4.32	6.48	5.21	6.98	2.68	4.56	8.93
90	IG49_AR2	ActiveIntergenicRegion	0	5.34	8.28	5.91	7.88	2.72	4.07	11.41
91	IG49_SR2	SilentIntergenicRegion	0	8.45	8.91	4.06	5.40	2.97	4.09	6.75