Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PES1	Gene	0	78.94	138.53	252.74	291.79	214.49	118.20	227.50
2	402281	Transcript	0	0.00	0.48	0.27	0.00	2.11	0.00	0.52
3	405677	Transcript	0	0.34	0.00	0.34	0.00	1.09	1.06	0.37
4	354694	Transcript	0	0.58	1.21	0.68	0.62	1.62	0.61	1.35
5	335214	Transcript	0	28.09	35.50	86.86	104.26	103.53	38.76	68.21
6	402284	Transcript	0	0.00	0.00	1.51	0.00	1.15	0.00	0.73
7	406208	Transcript	0	2.95	5.39	17.92	15.28	6.11	12.03	14.72
8	IG4	Intergenic	0	0.00	0.00	0.00	0.00	9.08	0.00	0.00
9	IG4_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	9.33	0.00	0.00
10	ER1a	ExonRegion	0	0.00	0.96	0.54	0.00	3.12	0.00	1.04
11	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	6.48	0.00	0.00
12	ER1b	ExonRegion	0	0.64	1.02	0.29	0.00	6.41	1.56	1.19
13	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.66
14	ER2a	ExonRegion	0	0.08	0.00	0.34	0.00	6.55	1.53	1.88
15	E2_Da	KnownBoundary	0	0.00	0.00	0.86	0.00	2.93	3.32	1.62
16	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	1.11	0.00	0.00
17	ER2b	ExonRegion	0	0.69	0.00	0.68	0.00	2.17	2.11	0.75
18	E2b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER4a	ExonRegion	0	0.00	0.89	0.58	0.70	1.09	0.70	0.38
21	E4a_E6a	KnownJunction	0	0.00	1.63	0.00	0.00	2.21	0.00	0.00
22	ER5a	ExonRegion	0	28.09	35.50	86.86	104.26	103.53	38.76	68.21
23	E5_Ac	KnownBoundary	0	116.98	133.30	371.66	405.96	430.70	152.97	264.03
24	ER5b	ExonRegion	0	81.31	88.68	259.87	276.20	295.49	104.93	185.88
25	ER5c	ExonRegion	0	143.23	113.69	401.39	349.05	357.68	137.67	262.73
26	E5a_E6a	KnownJunction	0	120.33	68.88	282.03	169.59	212.27	74.40	163.95
27	ER6a	ExonRegion	0	47.96	95.03	141.01	209.82	98.19	88.01	106.56
28	E6a_E7a	KnownJunction	0	45.78	169.40	156.23	400.24	145.79	158.39	134.93
29	ER7a	ExonRegion	0	233.24	259.03	742.65	562.29	526.52	278.00	430.57
30	E7a_E8a	KnownJunction	0	103.76	269.62	419.74	446.08	412.76	252.86	335.86
31	ER8a	ExonRegion	0	198.47	327.49	658.35	603.85	414.22	284.65	477.76
32	E8a_E9a	KnownJunction	0	221.99	267.55	722.74	488.24	516.25	231.52	507.55
33	ER9a	ExonRegion	0	150.69	237.57	485.48	488.74	480.65	176.27	505.85
34	E9a_E10a	KnownJunction	0	121.25	203.03	426.84	477.29	369.58	180.50	486.64
35	ER10a	ExonRegion	0	106.34	207.77	382.11	474.77	344.96	167.65	454.59
36	E10_Da	KnownBoundary	1	93.56	207.57	305.99	449.58	323.32	142.47	392.14
37	E10a_E11a	KnownJunction	0	0.00	0.00	1.51	0.00	1.15	0.00	0.73
38	ER10b	ExonRegion	0	91.78	192.14	276.92	401.11	333.26	145.34	377.35
39	E10b_E11a	KnownJunction	0	88.12	173.02	246.42	349.69	246.37	145.52	363.60
40	ER11a	ExonRegion	0	96.66	191.00	291.78	347.37	295.64	124.51	341.11
41	E11a_E12a	KnownJunction	0	69.58	126.63	230.23	209.22	171.10	107.04	242.65
42	ER12a	ExonRegion	0	71.67	136.63	194.81	235.03	197.99	97.56	193.90
43	E12a_E13a	KnownJunction	0	65.61	105.24	170.07	202.86	174.56	76.30	169.00
44	E12a_E14a	NovelJunction	0	0.00	2.57	3.23	13.06	0.00	1.34	1.92
45	ER13a	ExonRegion	0	68.25	130.79	209.23	239.35	194.76	63.11	198.35
46	E13a_E14a	KnownJunction	0	111.57	166.90	365.94	308.35	219.46	95.81	316.55
47	E13a_E14b	KnownJunction	0	2.95	5.39	17.92	15.28	6.11	12.03	14.72
48	E14_Ab	NovelBoundary	0	69.21	118.77	238.19	230.44	138.41	102.29	220.57
49	ER14a	ExonRegion	0	102.63	176.15	352.11	312.44	221.24	108.42	312.34
50	ER14b	ExonRegion	0	105.52	182.12	342.66	362.10	253.34	130.39	307.95
51	E14a_E15a	KnownJunction	0	96.03	184.90	368.33	353.95	216.86	143.65	271.98
52	ER15a	ExonRegion	0	117.37	191.62	388.03	405.80	299.78	138.68	366.17
53	E15a_E16a	KnownJunction	0	98.89	169.71	302.98	337.83	242.40	135.93	298.37
54	ER16a	ExonRegion	0	101.17	188.91	341.37	412.93	269.40	160.80	312.84
55	E16a_E17a	KnownJunction	0	89.74	229.38	339.74	408.18	264.83	185.72	281.81
56	ER17a	ExonRegion	0	88.83	222.17	299.78	451.15	232.18	180.27	281.72
57	E17a_E18a	KnownJunction	0	98.62	184.40	289.06	390.06	268.47	147.56	258.15
58	ER18a	ExonRegion	0	82.10	181.48	264.91	422.30	282.60	167.86	261.70
59	E18a_E19a	KnownJunction	0	128.03	178.25	394.08	474.31	348.01	167.10	343.05
60	ER19a	ExonRegion	0	73.18	160.76	229.59	372.82	216.87	162.90	236.89
61	E19_Da	KnownBoundary	0	49.35	108.61	133.82	258.75	89.88	113.12	145.94
62	ER19b	ExonRegion	0	26.97	68.41	82.15	149.03	82.47	69.01	101.90
63	E19_Db	KnownBoundary	0	18.71	30.26	39.91	58.27	33.15	33.15	39.15
64	ER19c	ExonRegion	0	7.92	17.45	21.08	19.50	20.69	17.61	18.07
65	ER19d	ExonRegion	0	3.27	6.38	4.40	4.05	6.68	3.06	6.91
66	ER19e	ExonRegion	0	1.15	2.43	1.35	1.25	3.24	1.23	2.70