Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HIRA	Gene	0	53.95	68.73	116.27	141.48	230.29	76.33	94.55
2	263208	Transcript	0	47.99	76.73	112.26	149.02	272.40	69.92	112.74
3	340170	Transcript	0	0.00	1.52	0.00	1.25	0.00	0.00	1.65
4	ER1a	ExonRegion	0	2.57	6.09	6.35	8.49	9.99	2.56	2.67
5	E1a_E2a	KnownJunction	1	18.34	28.50	49.07	43.62	92.56	18.97	18.63
6	ER2a	ExonRegion	0	28.18	39.03	74.56	71.75	111.97	40.91	35.18
7	E2a_E3a	KnownJunction	0	35.12	53.67	88.44	102.92	128.52	57.73	45.29
8	ER3a	ExonRegion	0	41.09	56.74	109.18	121.44	158.45	67.62	69.84
9	E3_Da	NovelBoundary	0	11.72	24.06	29.66	20.48	28.82	15.81	25.15
10	E3a_E4a	KnownJunction	0	59.72	61.55	133.86	112.35	154.34	87.93	66.93
11	I3_AR1	ActiveIntronRegion	0	11.36	20.30	15.37	25.04	51.35	10.64	17.96
12	ER4a	ExonRegion	0	61.26	81.56	140.45	143.95	225.31	75.70	87.11
13	E4a_E5a	KnownJunction	0	65.21	89.87	136.52	166.56	253.70	72.95	93.56
14	ER5a	ExonRegion	0	49.89	76.75	108.97	139.44	233.31	68.44	80.01
15	E5a_E6a	KnownJunction	1	52.12	44.82	121.20	85.20	240.05	43.74	49.76
16	ER6a	ExonRegion	0	95.62	86.57	182.00	160.64	342.80	55.94	99.76
17	E6a_E7a	KnownJunction	0	107.45	72.59	208.44	209.82	422.24	81.69	105.52
18	ER7a	ExonRegion	0	94.27	92.59	203.85	212.67	335.47	94.43	137.13
19	E7a_E8a	KnownJunction	0	92.21	91.50	184.99	159.35	371.80	66.28	93.53
20	ER8a	ExonRegion	0	150.70	91.89	226.33	186.17	433.38	101.23	134.68
21	E8a_E9a	KnownJunction	1	235.56	130.02	327.40	280.91	368.68	146.30	143.01
22	ER9a	ExonRegion	0	177.03	121.49	272.64	233.31	435.96	124.70	124.26
23	E9a_E10a	KnownJunction	0	119.27	78.92	201.98	210.42	412.37	92.49	103.92
24	ER10a	ExonRegion	0	87.53	72.52	171.00	183.99	301.62	90.12	100.48
25	E10a_E11a	KnownJunction	0	84.68	72.22	158.52	162.03	204.43	90.07	100.59
26	E10a_E12a	NovelJunction	1	0.00	1.16	2.16	10.92	0.00	14.26	0.00
27	ER11a	ExonRegion	0	52.74	85.59	139.11	156.60	199.23	88.34	100.23
28	E11a_E12a	KnownJunction	0	40.57	77.34	106.86	175.06	198.58	91.52	99.70
29	ER12a	ExonRegion	0	43.05	84.67	118.20	151.54	194.10	100.16	115.44
30	E12a_E13a	KnownJunction	0	45.10	93.11	122.06	145.26	182.72	93.75	128.40
31	ER13a	ExonRegion	0	40.99	86.35	139.99	159.29	201.78	97.52	115.65
32	E13a_E14a	KnownJunction	0	47.72	66.20	151.29	147.86	273.66	72.68	106.70
33	E13a_E15a	NovelJunction	1	3.61	3.02	15.85	13.14	3.53	20.93	17.43
34	ER14a	ExonRegion	0	43.97	74.76	126.90	173.59	194.37	90.70	101.78
35	E14a_E15a	KnownJunction	0	44.76	108.58	133.95	219.17	190.23	105.11	117.12
36	ER15a	ExonRegion	0	51.60	95.30	146.88	192.65	247.49	111.51	113.26
37	E15a_E16a	KnownJunction	0	48.22	64.37	131.34	151.03	272.42	89.81	96.29
38	E15a_E20a	KnownJunction	0	0.00	1.52	0.00	1.25	0.00	0.00	1.65
39	ER16a	ExonRegion	0	56.79	87.64	150.38	167.75	262.68	102.71	119.55
40	E16a_E17a	KnownJunction	0	51.52	84.91	111.36	125.51	226.15	71.47	94.06
41	E17_Aa	NovelBoundary	1	24.53	7.17	47.02	1.35	0.97	1.66	6.76
42	ER17a	ExonRegion	0	49.41	99.14	128.96	176.87	334.09	105.87	133.61
43	E17a_E18a	KnownJunction	0	36.88	80.94	108.84	148.46	289.98	53.06	94.34
44	ER18a	ExonRegion	0	36.14	67.14	89.90	139.77	212.29	59.95	110.87
45	E18a_E19a	KnownJunction	0	41.79	53.70	92.11	139.98	222.34	39.77	105.35
46	ER19a	ExonRegion	0	46.46	82.83	100.45	152.47	300.63	61.09	127.76
47	E19a_E20a	KnownJunction	0	64.67	69.91	96.96	139.36	330.99	45.51	132.81
48	ER20a	ExonRegion	0	74.46	79.97	124.01	155.64	437.47	70.36	136.47
49	E20a_E21a	KnownJunction	0	76.27	80.47	157.77	193.43	470.49	91.07	141.45
50	E20a_E22a	NovelJunction	0	1.37	6.86	2.97	18.02	0.90	4.07	0.89
51	ER21a	ExonRegion	0	78.22	84.46	168.67	184.97	434.16	88.86	164.09
52	E21a_E22a	KnownJunction	0	77.06	72.40	118.08	142.61	362.76	89.78	126.03
53	ER22a	ExonRegion	0	70.45	80.21	116.00	156.54	361.75	72.88	129.44
54	E22a_E23a	KnownJunction	0	44.50	63.79	72.28	124.13	178.89	59.87	61.58
55	ER23a	ExonRegion	0	33.39	64.73	80.68	144.55	225.02	61.13	87.75
56	E23a_E24a	KnownJunction	0	39.84	49.02	96.96	134.89	236.18	56.04	98.36
57	E23a_E25a	NovelJunction	0	2.47	8.91	4.58	19.45	2.21	16.91	0.89
58	ER24a	ExonRegion	0	37.48	51.56	109.10	126.90	234.67	59.95	97.29
59	E24a_E25a	KnownJunction	1	22.06	51.52	97.53	118.66	156.64	48.11	95.76
60	ER25a	ExonRegion	0	32.39	43.88	65.16	105.73	141.45	69.72	62.50