Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 YPEL1 Gene 0 7.43 5.67 3.96 2.85 43.58 4.89 2.61 2 339468 Transcript 0 5.75 2.23 2.01 0.82 56.87 3.05 0.64 3 403503 Transcript 0 0.00 0.60 0.00 0.00 0.87 0.61 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.55 1.14 0.00 5 ER1b ExonRegion 0 0.00 1.32 0.00 0.00 1.27 0.68 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 1.04 1.58 0.00 7 I1 Intron 0 2.46 2.25 1.48 1.50 13.55 1.94 0.25 8 I1_SR1 SilentIntronRegion 0 2.50 2.04 1.74 1.54 14.62 1.90 0.29 9 I1_AR1 ActiveIntronRegion 0 2.03 2.55 0.35 1.80 10.70 3.50 0.43 10 I1_SR2 SilentIntronRegion 0 3.17 2.83 1.31 0.74 15.43 0.85 0.34 11 I1_AR2 ActiveIntronRegion 0 5.01 4.03 3.13 1.79 16.72 2.13 0.21 12 I1_SR3 SilentIntronRegion 0 1.35 1.85 0.63 1.29 10.21 1.52 0.08 13 I1 Intron 0 1.33 1.78 0.73 0.99 9.28 1.74 0.15 14 I1_AR1 ActiveIntronRegion 0 2.26 1.44 0.32 0.30 14.69 1.18 0.16 15 I1_SR2 SilentIntronRegion 0 0.73 0.00 0.00 0.00 8.85 0.00 0.00 16 I1_AR2 ActiveIntronRegion 0 2.16 0.49 1.77 1.00 11.52 2.46 0.27 17 I1_SR3 SilentIntronRegion 0 1.03 2.48 0.71 1.17 8.76 2.07 0.16 18 ER2a ExonRegion 0 5.86 8.75 2.32 1.69 41.31 4.95 0.73 19 E2_Da NovelBoundary 0 1.60 5.83 0.89 0.00 7.42 8.23 0.00 20 E2a_E3a KnownJunction 0 0.00 1.21 0.00 0.00 0.00 1.02 0.00 21 E2a_E4a KnownJunction 0 4.32 1.52 2.73 0.00 52.70 0.00 0.00 22 I2_AR1 ActiveIntronRegion 0 2.73 6.38 1.44 4.25 11.53 5.10 0.82 23 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 1.75 0.20 0.00 24 E3_Da NovelBoundary 0 0.00 10.17 0.88 4.06 3.37 0.00 0.00 25 ER4a ExonRegion 0 5.33 1.52 1.92 0.00 47.54 3.68 0.00 26 E4a_E5a KnownJunction 0 5.17 1.52 0.70 0.00 48.73 4.29 0.00 27 E5_Aa NovelBoundary 0 0.95 7.80 0.00 1.33 5.21 2.89 0.00 28 ER5a ExonRegion 0 6.32 4.06 2.42 0.17 86.60 4.02 0.19 29 E5_Da NovelBoundary 0 0.00 6.88 0.00 1.68 2.90 11.95 1.71 30 E5a_E6a KnownJunction 0 11.05 1.16 1.88 2.36 117.11 3.08 1.32 31 ER6a ExonRegion 0 8.04 5.81 4.38 3.22 44.87 5.17 3.01