Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	POFUT2	Gene	0	34.61	80.44	30.22	97.17	44.72	123.72	33.43
2	349485	Transcript	1	27.81	84.67	35.94	160.27	110.68	217.19	67.06
3	331343	Transcript	1	15.30	17.34	10.47	10.51	7.39	6.56	4.96
4	334538	Transcript	1	21.15	31.74	23.31	31.09	15.83	29.67	4.24
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.73	0.07	0.31	0.00
6	ER1b	ExonRegion	0	4.53	21.22	2.43	29.49	6.70	40.87	1.92
7	E1a_E2a	KnownJunction	0	3.86	35.36	2.44	33.70	2.95	45.29	2.52
8	ER2a	ExonRegion	0	26.10	96.50	27.78	115.00	38.68	171.35	35.84
9	E2_Da	NovelBoundary	0	8.41	25.75	7.23	21.27	3.87	25.75	7.02
10	E2a_E3a	KnownJunction	0	33.80	93.42	40.74	117.87	84.83	175.67	51.92
11	E2a_E4a	NovelJunction	0	1.94	4.49	2.16	6.69	0.00	15.44	6.32
12	I2	Intron	0	11.04	21.08	12.47	14.19	6.18	12.36	4.80
13	I2_AR1	ActiveIntronRegion	0	11.91	27.53	12.47	21.38	6.14	15.32	4.75
14	I2_SR1	SilentIntronRegion	0	21.59	19.91	21.84	16.36	13.02	11.30	5.76
15	I2_AR2	ActiveIntronRegion	0	16.46	29.06	21.33	17.61	10.21	19.85	7.47
16	I2_SR2	SilentIntronRegion	0	12.25	13.04	10.68	10.86	3.90	10.81	3.44
17	ER3a	ExonRegion	0	42.82	135.29	42.93	146.85	77.15	205.52	58.80
18	E3_Da	NovelBoundary	0	22.13	37.17	9.53	45.87	8.44	76.86	8.05
19	E3a_E4a	KnownJunction	0	37.55	115.46	28.87	88.78	55.42	133.78	61.50
20	I3_SR2	SilentIntronRegion	0	13.23	8.93	16.05	15.22	3.71	3.86	2.75
21	I3_AR3	ActiveIntronRegion	1	14.53	12.56	14.50	26.10	2.92	9.50	2.58
22	ER4a	ExonRegion	0	54.17	136.40	46.87	165.69	88.14	202.57	74.47
23	E4a_E5a	KnownJunction	0	52.62	153.37	47.82	173.03	106.67	252.40	95.63
24	I4_AR2	ActiveIntronRegion	0	10.09	11.01	7.71	23.98	1.85	15.52	2.60
25	I4_AR3	ActiveIntronRegion	0	16.27	15.71	10.74	19.76	2.82	13.86	1.96
26	I4_AR4	ActiveIntronRegion	1	21.20	22.37	7.73	21.42	6.67	9.88	0.20
27	I4_SR3	SilentIntronRegion	1	18.91	17.38	12.19	28.07	3.72	12.01	4.71
28	I4_AR5	ActiveIntronRegion	1	25.78	11.42	15.56	19.58	4.85	12.82	1.96
29	ER5a	ExonRegion	0	60.86	164.40	46.05	180.79	98.91	222.80	79.69
30	E5_Da	NovelBoundary	1	15.84	19.13	12.76	1.41	3.32	3.30	1.63
31	E5a_E6a	KnownJunction	0	67.84	149.54	41.53	168.72	71.65	230.18	60.13
32	ER6a	ExonRegion	0	57.75	137.59	42.36	181.65	77.18	228.50	67.00
33	E6a_E7a	KnownJunction	0	58.43	85.07	39.59	126.68	60.33	183.66	39.81
34	ER7a	ExonRegion	0	55.84	131.53	48.08	168.04	77.32	216.39	49.96
35	E7a_E8a	KnownJunction	0	59.25	142.71	52.51	175.82	97.17	188.13	49.66
36	ER8a	ExonRegion	0	68.50	152.23	81.45	216.57	126.49	251.71	75.66
37	E8_Da	KnownBoundary	0	12.58	17.81	13.98	14.30	10.14	3.89	5.47
38	E8a_E8b	KnownJunction	1	12.05	17.73	16.25	28.39	11.41	24.31	3.58
39	E8a_E8c	KnownJunction	0	27.81	84.67	35.94	160.27	110.68	217.19	67.06
40	ER8b	ExonRegion	1	22.14	21.42	16.05	16.10	9.66	8.92	6.44
41	E8_Ab	KnownBoundary	0	14.27	29.74	14.50	24.90	6.55	16.59	5.69
42	ER8c	ExonRegion	1	34.16	60.17	33.00	47.95	18.25	34.29	8.14
43	E8_Db	KnownBoundary	0	4.36	21.28	3.55	7.26	5.03	3.14	4.10
44	E8b_E8c	KnownJunction	1	30.26	45.74	30.36	33.78	20.24	35.03	4.90
45	ER8d	ExonRegion	0	8.46	13.27	4.90	4.92	5.13	4.21	3.48
46	E8_Ac	KnownBoundary	0	8.48	2.65	5.29	3.58	4.31	1.50	1.76
47	ER8e	ExonRegion	0	45.37	122.55	40.73	158.89	70.08	212.27	53.66
48	ER8f	ExonRegion	0	3.07	6.99	4.83	5.14	8.81	6.59	4.05