Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TMPRSS2	Gene	0	285.60	198.30	8.53	4.10	49.71	14.66	0.72
2	332149	Transcript	0	181.49	188.98	4.95	2.98	10.17	19.82	0.21
3	398585	Transcript	0	0.20	0.16	0.00	0.08	0.00	0.08	0.00
4	ER1a	ExonRegion	0	163.17	117.55	1.99	1.56	4.81	14.37	0.00
5	E1a_E2a	KnownJunction	0	314.72	214.45	5.93	3.17	6.82	28.62	0.00
6	E1a_E5a	NovelJunction	0	4.52	11.43	0.00	0.00	0.00	1.07	0.00
7	ER2a	ExonRegion	0	163.98	197.73	4.79	2.25	14.38	19.81	0.15
8	E2a_E4a	KnownJunction	0	84.08	226.17	7.08	4.96	14.66	16.48	0.67
9	ER3a	ExonRegion	0	0.20	0.16	0.00	0.08	0.00	0.08	0.00
10	ER4a	ExonRegion	0	251.04	225.22	10.22	3.76	31.38	19.67	0.81
11	E4a_E5a	KnownJunction	0	157.37	198.35	7.67	1.41	32.41	10.69	0.73
12	ER5a	ExonRegion	0	136.30	195.94	5.71	2.36	23.69	8.78	0.29
13	E5a_E6a	KnownJunction	0	145.47	179.22	3.64	0.00	21.83	12.89	0.69
14	E5a_E7a	NovelJunction	0	15.14	12.40	2.04	0.00	3.23	0.00	0.00
15	ER6a	ExonRegion	0	170.58	209.23	5.46	1.62	30.46	17.98	1.19
16	E6a_E7a	KnownJunction	0	160.42	171.55	4.48	2.55	31.79	8.63	1.78
17	I6_SR2	SilentIntronRegion	0	62.13	3.44	0.90	0.00	1.63	0.00	0.00
18	I6_AR2	ActiveIntronRegion	0	67.60	2.68	0.94	0.31	2.00	0.00	0.00
19	ER7a	ExonRegion	0	182.06	187.83	4.44	1.80	26.38	15.68	0.48
20	E7a_E8a	KnownJunction	0	221.63	168.48	3.82	1.46	40.00	11.18	0.66
21	ER8a	ExonRegion	0	288.50	212.47	10.14	3.85	45.94	13.32	2.13
22	E8a_E9a	KnownJunction	0	248.26	179.09	5.91	2.74	43.18	10.16	0.70
23	ER9a	ExonRegion	1	271.80	224.20	7.59	6.09	39.87	7.08	0.95
24	E9a_E10a	KnownJunction	1	228.20	191.41	8.25	9.08	34.30	1.63	0.85
25	ER10a	ExonRegion	0	338.09	156.82	9.10	3.32	43.41	9.37	0.59
26	E10a_E11a	KnownJunction	0	539.35	189.86	12.80	4.09	82.21	7.85	1.50
27	E11_Aa	NovelBoundary	0	145.17	20.02	2.20	0.00	1.82	6.22	0.00
28	ER11a	ExonRegion	0	766.33	286.62	18.39	2.98	87.29	16.96	1.12
29	E11a_E12a	KnownJunction	0	513.22	202.29	12.39	5.04	91.82	12.09	0.89
30	E11a_E13a	NovelJunction	0	36.92	8.56	0.00	0.00	4.01	0.00	0.00
31	ER12a	ExonRegion	0	310.16	161.13	8.83	3.03	59.89	9.80	0.26
32	E12a_E13a	KnownJunction	0	191.60	126.18	4.04	2.95	41.52	12.70	0.00
33	ER13a	ExonRegion	0	235.80	165.90	6.41	5.25	65.28	11.72	0.42
34	E13a_E14a	KnownJunction	0	279.46	179.20	5.33	1.49	73.24	14.47	0.62
35	I13	Intron	0	101.08	14.49	1.41	0.37	0.73	0.55	0.00
36	I13_SR1	SilentIntronRegion	0	64.00	14.58	0.31	0.00	0.40	0.00	0.00
37	I13_AR1	ActiveIntronRegion	0	120.06	14.56	1.96	0.56	0.90	0.82	0.00
38	ER14a	ExonRegion	0	386.63	260.36	12.16	6.10	72.43	18.30	0.45
39	E14a_E15a	KnownJunction	0	422.27	258.59	7.99	10.46	85.30	23.53	0.89
40	ER15a	ExonRegion	0	263.85	192.39	8.12	4.78	53.90	14.70	0.72
41	IG17	Intergenic	0	1.96	4.55	2.21	7.96	0.30	11.11	1.68
42	IG17_SR4	SilentIntergenicRegion	0	2.12	2.33	0.65	2.79	0.00	8.20	1.92
43	IG17_AR2	ActiveIntergenicRegion	0	2.64	3.82	2.86	8.26	0.27	12.15	1.11
44	IG17_SR2	SilentIntergenicRegion	0	1.99	6.13	2.54	10.32	0.39	12.68	2.09
45	IG17_SR1	SilentIntergenicRegion	0	1.20	3.62	2.27	6.09	0.49	11.57	1.71