Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MX2	Gene	0	3.67	1.45	4.09	4.50	12.14	75.55	1.11
2	330714	Transcript	0	3.63	0.93	4.43	3.70	11.85	70.38	1.28
3	398632	Transcript	0	0.41	0.35	0.03	1.35	0.47	15.00	0.09
4	ER1a	ExonRegion	0	0.05	0.33	0.14	0.53	0.00	41.39	0.37
5	E1a_E2a	KnownJunction	0	0.00	1.05	0.53	1.14	0.00	100.07	0.63
6	ER2a	ExonRegion	0	7.99	3.54	5.79	5.87	18.17	144.44	1.31
7	E2_Da	NovelBoundary	0	0.78	0.00	0.00	0.00	0.90	41.03	0.00
8	E2a_E3a	KnownJunction	0	3.74	1.60	1.52	5.50	13.60	47.54	0.89
9	I2	Intron	0	1.00	0.00	0.05	1.50	0.32	40.76	0.16
10	I2_SR1	SilentIntronRegion	0	1.00	0.00	0.05	1.50	0.32	40.88	0.16
11	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	1.68	0.00	20.93	0.00
12	ER3a	ExonRegion	0	2.11	0.29	2.30	4.69	11.08	53.68	1.10
13	E3a_E4a	KnownJunction	0	1.79	0.00	3.13	3.28	5.39	54.48	0.89
14	E3a_E5a	NovelJunction	0	0.83	0.00	0.00	0.00	0.00	21.65	0.00
15	ER4a	ExonRegion	0	2.32	0.68	1.91	4.36	8.96	46.25	0.95
16	E4a_E5a	KnownJunction	0	2.65	0.00	2.30	3.09	7.77	42.64	0.00
17	I4_SR1	SilentIntronRegion	0	2.66	0.00	0.66	2.66	0.84	18.06	0.00
18	I4_AR3	ActiveIntronRegion	0	1.08	1.20	0.00	1.61	1.70	17.37	0.00
19	ER5a	ExonRegion	0	2.18	0.00	3.89	5.99	10.07	68.49	1.22
20	E5a_E6a	KnownJunction	0	2.64	0.00	0.53	2.57	6.94	61.67	3.24
21	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	1.18	10.16	0.00
22	ER6a	ExonRegion	0	2.74	1.32	4.37	3.12	11.99	71.69	1.80
23	E6a_E7a	KnownJunction	0	0.93	2.02	4.43	1.35	12.15	80.69	2.15
24	ER7a	ExonRegion	0	2.63	1.37	4.80	2.29	12.99	97.63	1.38
25	E7a_E8a	KnownJunction	0	0.97	0.00	4.33	3.14	8.07	58.88	0.00
26	ER8a	ExonRegion	0	2.33	1.05	5.26	6.44	12.29	57.95	0.73
27	E8a_E9a	KnownJunction	0	2.65	0.00	3.41	9.37	13.97	71.74	0.66
28	ER9a	ExonRegion	0	2.42	0.48	4.30	7.76	13.14	50.38	0.68
29	E9a_E10a	KnownJunction	0	5.91	1.63	4.74	2.76	10.72	56.47	1.52
30	E9a_E11a	NovelJunction	0	0.00	0.00	0.76	0.00	0.00	10.43	0.00
31	ER10a	ExonRegion	0	7.31	1.82	12.10	3.05	21.27	102.46	2.07
32	E10_Da	NovelBoundary	0	4.37	0.00	0.00	1.25	1.18	20.69	0.00
33	E10a_E11a	KnownJunction	0	9.40	1.52	12.65	4.28	24.07	103.72	2.11
34	ER11a	ExonRegion	0	8.89	1.18	9.69	3.14	19.26	90.51	1.27
35	E11a_E12b	KnownJunction	0	7.51	1.58	5.29	1.46	14.43	57.43	1.50
36	ER12a	ExonRegion	0	0.26	0.29	0.11	0.14	1.80	4.23	0.00
37	E12_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	4.37	0.00
38	ER12b	ExonRegion	0	6.14	3.92	6.47	2.10	18.29	76.32	2.14
39	E12_Da	KnownBoundary	0	0.00	3.36	1.01	0.00	1.18	23.45	0.00
40	E12a_E13a	KnownJunction	0	4.39	0.00	4.51	0.00	16.18	58.64	2.95
41	ER12c	ExonRegion	0	1.38	1.09	0.02	1.91	0.06	22.88	0.35
42	E12b_E13a	KnownJunction	0	0.00	0.00	0.00	3.36	0.00	29.35	0.00
43	ER13a	ExonRegion	0	6.08	1.78	7.32	6.59	19.58	109.23	1.63
44	E13a_E14a	KnownJunction	0	8.66	0.00	10.58	8.56	26.95	150.96	1.69
45	ER14a	ExonRegion	0	4.48	2.15	4.82	7.85	16.94	113.07	1.59
46	ER14b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	3.54	0.00
47	IG16_AR2	ActiveIntergenicRegion	0	0.70	0.00	0.31	0.57	0.25	10.51	0.00