Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 DSCAM Gene 0 0.12 0.00 17.97 20.68 0.22 0.15 6.55 2 400454 Transcript 0 0.04 0.00 3.60 4.23 0.00 0.07 1.20 3 404019 Transcript 0 0 0 0 0 0 0 0 4 304537 Transcript 0 0.00 0.00 3.73 9.98 0.00 0.00 2.02 5 IG13_AR9 ActiveIntergenicRegion 0 3.89 2.14 7.63 10.14 0.00 0.53 0.30 6 IG13_SR8 SilentIntergenicRegion 0 6.08 1.76 13.46 11.64 0.11 3.05 0.35 7 IG13_AR8 ActiveIntergenicRegion 0 1.77 2.45 4.74 9.81 0.36 0.76 0.44 8 IG13_SR7 SilentIntergenicRegion 0 5.32 0.84 6.78 8.39 0.26 0.10 0.54 9 ER1a ExonRegion 0 0.00 0.00 0.00 1.25 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 0.81 2.94 0.00 0.00 0.58 11 E1a_E2b KnownJunction 0 0.00 0.00 7.23 23.35 0.00 0.00 4.70 12 I1_AR3 ActiveIntronRegion 0 0.00 0.00 9.33 1.54 0.00 0.00 0.00 13 I1_AR4 ActiveIntronRegion 0 0.00 0.00 17.49 2.76 0.00 0.00 1.35 14 I1_AR5 ActiveIntronRegion 0 0.00 0.00 17.41 5.49 0.00 0.00 1.42 15 I1_AR7 ActiveIntronRegion 0 0.77 1.56 6.97 13.18 0.00 0.00 3.52 16 ER2a ExonRegion 0 0.00 0.00 3.73 9.98 0.00 0.00 2.02 17 ER2b ExonRegion 0 0.00 0.00 18.80 33.04 0.00 0.00 5.11 18 E2a_E3a KnownJunction 0 0.00 0.00 25.62 32.21 0.00 0.00 5.29 19 ER3a ExonRegion 0 0.40 0.00 29.62 44.84 0.28 0.00 10.80 20 E3a_E4a KnownJunction 0 0.00 0.00 22.40 42.70 0.00 0.00 8.99 21 ER4a ExonRegion 0 0.40 0.00 22.83 35.05 0.20 0.00 9.70 22 E4a_E5a KnownJunction 0 0.00 0.00 17.17 15.96 1.04 0.00 5.85 23 ER5a ExonRegion 0 0.41 0.00 16.11 28.87 0.34 0.00 7.43 24 E5a_E6a KnownJunction 0 0.00 0.00 16.45 38.33 0.00 0.00 7.01 25 ER6a ExonRegion 0 0.35 0.00 21.68 26.48 0.45 0.00 6.78 26 E6a_E7a KnownJunction 0 0.00 0.00 9.40 26.58 0.00 0.00 6.26 27 ER7a ExonRegion 0 0.15 0.00 15.37 25.39 0.16 0.00 6.58 28 E7a_E8a KnownJunction 0 0.63 0.00 15.43 12.43 0.88 0.00 5.92 29 ER8a ExonRegion 0 0.26 0.00 28.70 34.85 0.33 0.00 9.45 30 E8a_E9a KnownJunction 0 0.00 0.00 28.38 28.96 1.08 0.00 4.93 31 ER9a ExonRegion 0 0.00 0.00 20.78 21.04 0.39 0.00 7.42 32 E9a_E10a KnownJunction 0 0.00 0.00 26.70 15.12 0.00 0.00 7.29 33 ER10a ExonRegion 0 0.00 0.00 25.35 27.10 0.36 1.49 9.02 34 E10a_E11a KnownJunction 0 0.00 0.00 18.94 30.29 0.00 0.00 6.79 35 ER11a ExonRegion 0 0.00 0.00 21.75 27.20 0.47 1.11 8.16 36 E11a_E12a KnownJunction 0 0.00 0.00 23.22 23.95 0.00 0.00 9.00 37 ER12a ExonRegion 0 0.00 0.00 28.38 24.43 0.51 0.00 8.48 38 E12a_E13a KnownJunction 0 0.00 0.00 45.07 19.91 1.08 0.00 11.08 39 ER13a ExonRegion 0 0.00 0.00 44.80 23.04 0.67 0.00 13.48 40 E13a_E14a KnownJunction 0 0.00 0.00 42.41 32.54 0.00 0.00 16.27 41 ER14a ExonRegion 0 0.00 0.00 41.25 29.98 0.45 0.00 14.44 42 E14a_E15a KnownJunction 0 0.00 0.00 24.73 14.49 2.12 0.00 7.09 43 ER15a ExonRegion 0 0.00 0.00 21.53 16.86 0.14 0.00 10.65 44 E15a_E16a KnownJunction 0 0.00 0.00 12.60 7.64 0.00 0.00 7.19 45 ER16a ExonRegion 0 0.00 0.00 16.92 11.78 0.60 0.00 10.42 46 E16a_E17a KnownJunction 0 0.00 0.00 21.67 18.07 0.88 0.00 13.03 47 ER17a ExonRegion 0 0.00 0.00 28.38 18.73 0.26 0.00 10.99 48 E17a_E18a KnownJunction 0 0.00 0.00 26.11 20.05 1.18 0.00 8.83 49 ER18a ExonRegion 0 0.40 0.00 24.57 21.47 0.13 0.00 7.99 50 E18a_E19a KnownJunction 0 0.00 0.00 25.32 20.56 0.00 0.00 11.34 51 ER19a ExonRegion 0 0.37 0.00 24.16 21.68 0.00 0.39 9.57 52 E19a_E20a KnownJunction 0 0.00 0.00 22.19 17.47 0.00 1.53 3.75 53 ER20a ExonRegion 0 0.00 0.00 18.00 26.40 0.31 0.82 8.36 54 E20a_E21a KnownJunction 0 0.00 0.00 19.92 26.01 0.00 1.15 7.67 55 ER21a ExonRegion 0 0.00 0.00 19.22 23.99 0.00 0.10 5.52 56 E21a_E22a KnownJunction 0 0.00 0.00 31.84 23.43 0.00 0.00 4.97 57 ER22a ExonRegion 0 0.00 0.00 29.71 24.64 0.56 0.00 7.05 58 E22a_E23a KnownJunction 0 0.00 0.00 28.51 26.58 1.18 0.00 5.73 59 ER23a ExonRegion 0 0.00 0.00 37.94 30.77 0.86 0.00 6.54 60 E23a_E24a KnownJunction 0 0.00 0.00 23.52 19.97 0.00 0.00 3.07 61 ER24a ExonRegion 0 0.00 0.00 24.85 23.30 0.40 0.84 5.40 62 E24a_E25a KnownJunction 0 0.00 0.00 25.16 24.60 0.00 1.05 5.72 63 ER25a ExonRegion 0 0.00 0.00 24.78 27.90 0.27 1.53 8.72 64 E25a_E26a KnownJunction 0 0.00 0.00 27.91 29.07 1.01 0.00 9.26 65 ER26a ExonRegion 0 0.00 0.00 20.64 20.92 0.25 0.64 7.56 66 E26a_E27a KnownJunction 0 0.00 0.00 31.64 22.21 0.00 0.00 6.88 67 ER27a ExonRegion 0 0.00 0.00 18.29 24.09 0.01 0.00 8.46 68 E27a_E28a KnownJunction 0 0.00 0.00 23.21 26.74 0.00 0.00 6.66 69 E28a_E29a KnownJunction 0 0.00 0.00 19.17 18.12 2.31 0.00 7.87 70 ER28a ExonRegion 0 0.00 0.00 28.76 29.69 1.62 0.00 8.99 71 ER29a ExonRegion 0 0.00 0.00 19.80 25.43 0.62 0.00 8.85 72 E29a_E30a KnownJunction 0 0.00 0.00 23.35 19.29 0.00 0.00 11.22 73 ER30a ExonRegion 0 0.37 0.00 20.35 26.66 0.55 0.00 10.20 74 E30a_E31a KnownJunction 0 0.00 0.00 13.69 19.15 0.00 0.00 8.83 75 ER31a ExonRegion 0 0.28 0.00 16.43 34.07 0.00 0.00 11.09 76 E31a_E32a KnownJunction 0 0.00 0.00 17.19 30.18 0.00 0.00 12.47 77 ER32a ExonRegion 0 0.00 0.00 16.66 32.33 0.14 0.00 8.58 78 E32a_E33a KnownJunction 0 0.00 0.00 15.52 31.21 0.00 0.00 5.52 79 ER33a ExonRegion 0 0.00 0.00 10.01 14.98 0.00 0.00 4.58 80 E33_Da KnownBoundary 0 0.00 0.00 16.55 8.10 0.00 0.00 7.45 81 ER33b ExonRegion 0 0.34 0.00 16.12 13.18 0.27 0.00 4.75 82 E33_Db KnownBoundary 0 0.00 0.00 3.22 7.83 0.00 0.00 0.89 83 ER33c ExonRegion 0 0.08 0.00 7.20 7.21 0.00 0.13 2.40