Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MCM3AP	Gene	0	104.82	134.28	146.35	143.59	154.99	88.49	107.01
2	397708	Transcript	0	16.74	30.69	26.64	22.49	20.58	16.76	15.10
3	291688	Transcript	0	0	0	0	0	0	0	0
4	ER1a	ExonRegion	0	4.56	15.20	6.61	14.19	4.45	8.45	5.73
5	E1a_E2a	KnownJunction	0	1.70	8.41	3.23	0.00	0.00	1.66	0.89
6	I1	Intron	0	18.42	31.64	22.40	28.65	17.41	15.74	12.48
7	I1_AR1	ActiveIntronRegion	0	23.85	42.98	30.27	39.59	22.61	21.81	15.58
8	ER2a	ExonRegion	0	54.56	95.51	89.94	64.53	60.06	49.56	51.10
9	E2_Ab	KnownBoundary	0	114.73	136.43	160.55	109.64	102.75	85.46	91.03
10	ER2b	ExonRegion	0	136.99	137.92	198.46	142.92	138.19	76.67	99.59
11	E2a_E3a	KnownJunction	0	150.34	145.12	181.22	167.23	148.16	73.86	107.41
12	ER3a	ExonRegion	0	167.58	145.63	234.79	165.26	195.77	79.25	135.73
13	E3a_E4a	KnownJunction	0	127.18	124.21	236.09	119.99	168.52	69.63	119.81
14	E3a_E5a	NovelJunction	0	0.62	7.01	2.93	8.97	0.00	6.73	2.14
15	ER4a	ExonRegion	0	162.74	153.23	258.74	153.55	226.88	106.66	155.20
16	E4a_E5a	KnownJunction	0	147.79	122.00	198.57	147.05	121.86	100.77	121.16
17	ER5a	ExonRegion	0	89.90	107.96	159.00	120.69	122.44	65.99	104.69
18	E5a_E6a	KnownJunction	0	82.88	114.15	157.48	143.26	123.61	95.89	108.76
19	ER6a	ExonRegion	0	65.56	120.84	113.90	118.58	99.17	68.37	97.75
20	E6a_E7a	KnownJunction	0	64.01	137.27	113.18	111.83	94.42	63.11	82.28
21	ER7a	ExonRegion	0	67.19	126.31	96.36	115.58	113.79	62.29	94.43
22	E7a_E8a	KnownJunction	0	69.93	133.72	103.50	113.05	149.45	69.65	102.57
23	ER8a	ExonRegion	0	86.69	105.91	98.39	137.08	144.37	65.62	107.52
24	E8a_E9a	KnownJunction	0	118.67	143.23	135.79	189.66	239.17	82.54	152.49
25	ER9a	ExonRegion	0	141.17	174.70	170.53	173.58	222.12	80.18	151.97
26	E9_Da	NovelBoundary	0	5.99	7.99	6.18	3.63	57.72	0.00	6.45
27	E9a_E10a	KnownJunction	0	128.76	129.73	187.86	135.21	182.86	56.57	129.99
28	E9a_E11a	NovelJunction	0	0.00	11.09	0.00	2.84	3.30	1.02	0.00
29	ER10a	ExonRegion	0	174.11	117.22	235.66	139.89	224.37	60.23	149.78
30	E10a_E11a	KnownJunction	0	106.10	76.82	139.59	109.83	165.47	59.52	97.50
31	I10_AR1	ActiveIntronRegion	0	20.29	25.04	24.42	12.96	34.22	6.83	20.52
32	E11_Aa	NovelBoundary	0	56.70	23.25	62.73	11.68	25.98	1.13	22.26
33	ER11a	ExonRegion	0	113.78	102.58	158.28	147.73	175.30	65.58	126.01
34	E11a_E12a	KnownJunction	0	76.97	112.31	93.34	133.32	109.75	65.07	95.86
35	ER12a	ExonRegion	0	68.80	107.87	103.48	110.94	118.13	67.48	94.00
36	E12a_E13a	KnownJunction	0	46.77	97.36	78.82	99.18	54.77	49.07	92.54
37	ER13a	ExonRegion	0	47.28	94.00	75.62	96.00	91.49	53.73	78.66
38	E13a_E14a	KnownJunction	0	51.99	78.97	88.21	88.48	119.78	41.38	67.09
39	E13a_E15a	NovelJunction	1	1.03	5.02	6.96	19.42	0.90	3.83	4.92
40	ER14a	ExonRegion	0	59.15	94.63	78.94	102.52	113.80	42.01	74.51
41	E14a_E15a	KnownJunction	0	64.71	109.68	99.54	99.13	85.60	64.96	91.55
42	ER15a	ExonRegion	0	93.69	126.52	115.51	152.52	151.68	80.87	101.00
43	E15a_E16a	KnownJunction	0	87.14	156.66	122.46	188.47	156.94	100.55	106.30
44	ER16a	ExonRegion	0	128.08	151.03	162.45	169.52	193.67	98.80	138.38
45	E16a_E17a	KnownJunction	0	162.23	146.28	180.07	177.99	136.96	100.98	121.26
46	ER17a	ExonRegion	0	116.81	135.35	154.41	143.29	176.55	95.22	120.56
47	E17a_E18a	KnownJunction	0	152.28	145.07	183.93	119.42	209.16	104.17	125.93
48	ER18a	ExonRegion	0	107.04	111.55	131.99	106.56	150.79	70.03	87.62
49	E18a_E19a	KnownJunction	0	129.71	115.07	119.30	132.45	149.98	71.50	92.39
50	ER19a	ExonRegion	0	123.54	119.36	122.57	121.41	192.22	67.64	96.69
51	E19a_E20a	KnownJunction	0	93.95	106.27	122.09	105.28	194.77	69.65	99.00
52	ER20a	ExonRegion	0	121.83	158.36	127.76	165.05	194.44	94.98	124.94
53	E20a_E21a	KnownJunction	0	155.10	135.69	157.74	181.59	213.01	86.43	129.08
54	ER21a	ExonRegion	0	117.15	143.33	146.53	178.75	226.27	104.44	136.12
55	E21a_E22a	KnownJunction	0	91.83	131.72	147.89	151.20	193.28	78.63	116.20
56	ER22a	ExonRegion	0	84.31	152.80	114.41	166.38	196.50	89.18	116.08
57	E22_Da	NovelBoundary	0	30.63	63.60	27.85	37.28	34.76	31.09	24.88
58	E22a_E23a	KnownJunction	0	73.52	135.98	117.59	114.78	203.19	88.04	115.71
59	Ix	Intron	0	19.49	39.17	26.53	28.79	29.95	15.81	15.59
60	Ix_AR1	ActiveIntronRegion	0	19.66	39.49	26.74	29.02	30.20	15.94	15.72
61	E23_Aa	NovelBoundary	0	34.43	37.02	40.83	53.02	48.09	23.72	35.00
62	ER23a	ExonRegion	0	109.67	169.00	156.27	177.17	253.55	116.74	135.61
63	E23a_E24a	KnownJunction	0	99.00	169.19	167.33	184.27	250.93	105.83	125.89
64	ER24a	ExonRegion	0	90.40	154.31	135.59	147.40	154.55	107.20	113.25
65	E24a_E25a	KnownJunction	0	66.39	116.04	107.40	128.87	107.80	106.13	92.81
66	ER25a	ExonRegion	0	78.40	111.79	106.80	136.48	124.97	110.69	87.35
67	E25a_E26a	KnownJunction	0	87.52	122.64	142.51	163.47	99.29	112.96	88.37
68	E25a_E27a	NovelJunction	1	0.70	10.93	0.76	0.00	0.00	0.00	0.87
69	E26_Aa	NovelBoundary	1	34.88	1.63	59.85	0.00	7.52	0.00	3.40
70	ER26a	ExonRegion	0	76.13	132.96	122.65	155.45	147.17	134.55	95.99
71	E26a_E27a	KnownJunction	0	101.84	208.67	169.21	235.64	255.96	178.75	146.28
72	ER27a	ExonRegion	0	108.68	202.07	161.49	202.42	221.02	164.78	136.96
73	E27a_E28a	KnownJunction	0	141.91	237.36	173.49	239.00	282.26	192.21	147.13
74	ER28a	ExonRegion	0	135.09	257.47	194.57	279.33	263.30	224.50	162.31
75	E28a_E29a	KnownJunction	0	93.65	233.26	133.51	249.54	137.93	202.47	122.55
76	ER29a	ExonRegion	0	61.23	126.36	86.67	144.92	104.57	139.87	69.87
77	ER29b	ExonRegion	0	6.15	3.64	6.77	11.22	17.82	7.36	2.70