Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 FTCD Gene 0 0.31 0.48 0.10 0.27 3.74 0.39 0.29 2 397743 Transcript 0 0 0 0 0 0 0 0 3 397746 Transcript 0 0 0 0 0 0 0 0 4 291670 Transcript 0 0 0 0 0 0 0 0 5 355384 Transcript 0 0 0 0 0 0 0 0 6 359679 Transcript 0 0 0 0 0 0 0 0 7 397748 Transcript 0 0.00 0.00 0.00 0.00 0.81 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.42 0.00 0.00 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 0.32 0.00 0.00 0.00 1.33 0.00 0.23 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.66 12 E2b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 1.35 0.00 1.35 15 ER3b ExonRegion 0 0.00 0.75 0.10 0.00 0.61 0.73 1.18 16 E3a_E4a KnownJunction 0 0.00 0.00 0.72 0.00 0.00 0.00 0.57 17 ER4a ExonRegion 0 0.00 0.53 0.40 0.00 0.66 0.00 0.08 18 E4a_E5a KnownJunction 0 0.00 1.63 0.00 0.00 0.97 0.00 0.00 19 ER5a ExonRegion 0 0.00 1.79 0.00 0.00 2.00 0.00 0.00 20 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.99 0.00 0.00 21 ER6a ExonRegion 0 0.23 1.34 0.00 1.36 2.63 0.00 0.37 22 E6a_E7a KnownJunction 0 0.68 0.00 0.00 0.00 2.35 0.00 0.00 23 ER7a ExonRegion 0 0.80 0.00 0.00 0.00 2.14 0.00 0.00 24 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.72 0.00 0.00 26 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER9a ExonRegion 0 0.00 0.01 0.00 0.00 0.76 0.00 0.00 28 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 1.15 0.00 0.00 29 ER10a ExonRegion 0 0.00 0.53 0.00 0.00 1.95 1.73 0.00 30 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 2.31 0.00 0.00 31 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 I10_SR3 SilentIntronRegion 0 1.29 1.48 0.84 0.00 11.01 3.12 0.19 33 ER11a ExonRegion 0 0.00 0.08 0.00 0.09 4.18 0.00 0.00 34 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 5.49 0.00 0.00 35 ER12a ExonRegion 0 0.20 0.62 0.00 1.33 7.38 0.00 0.14 36 E12a_E13a KnownJunction 0 1.03 0.00 0.00 1.60 13.85 0.00 1.26 37 ER13a ExonRegion 0 0.93 0.00 0.00 0.00 15.37 1.35 1.66 38 E13a_E14a KnownJunction 0 0.00 0.00 0.00 1.33 16.92 1.66 0.89 39 E13a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E14_Ab NovelBoundary 0 0.00 0.00 0.00 0.00 12.17 2.76 0.56 41 ER14a ExonRegion 0 0.00 0.00 0.00 0.00 16.43 1.34 0.67 42 ER14b ExonRegion 0 0.66 0.00 0.00 0.68 13.35 0.41 1.38 43 E14_Da KnownBoundary 0 1.54 0.00 0.00 1.68 13.12 0.00 1.35 44 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.92 0.00 0.00 45 ER14c ExonRegion 0 1.95 0.83 0.98 0.69 9.35 2.10 0.98 46 E14_Db KnownBoundary 0 0.78 2.89 0.89 0.00 6.04 1.26 0.00 47 E14b_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER14d ExonRegion 0 0.37 0.93 0.25 0.70 3.58 0.29 0.01 49 ER15a ExonRegion 0 0.50 0.00 0.22 0.00 4.04 0.40 0.00 50 ER15b ExonRegion 0 0.00 0.00 0.00 0.00 0.81 0.00 0.00