Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AGPAT3	Gene	0	61.28	42.99	70.73	54.83	14.65	26.80	70.58
2	291572	Transcript	0	2.50	12.15	1.83	14.93	1.58	2.10	6.70
3	398061	Transcript	0	0.98	0.01	1.00	4.01	0.00	1.06	0.33
4	327505	Transcript	0	1.10	0.29	1.03	2.01	1.31	0.04	1.95
5	398063	Transcript	0	0.00	0.01	0.00	0.02	0.01	0.02	0.01
6	398058	Transcript	0	0.30	0.18	0.50	0.75	0.47	0.00	0.17
7	ER1a	ExonRegion	0	2.35	9.15	2.14	9.78	1.99	4.20	6.25
8	E1a_E3b	KnownJunction	1	2.65	15.16	1.51	20.07	1.18	0.00	7.15
9	ER2a	ExonRegion	0	1.22	0.02	1.43	2.87	0.00	0.51	0.67
10	E2a_E3b	KnownJunction	0	0.75	0.00	0.57	5.15	0.00	1.61	0.00
11	ER3a	ExonRegion	0	1.10	0.29	1.03	2.01	1.31	0.04	1.95
12	E3_Ab	KnownBoundary	0	1.49	0.00	2.08	3.85	3.18	0.00	2.81
13	ER3b	ExonRegion	0	13.13	35.17	15.10	35.66	4.82	11.71	21.57
14	E3a_E8a	KnownJunction	0	22.82	48.84	23.85	47.33	4.20	23.29	40.36
15	ER4a	ExonRegion	0	0.00	0.02	0.00	0.05	0.01	0.05	0.01
16	E4a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER5a	ExonRegion	0	0.91	0.00	1.20	0.00	0.00	0.00	0.40
18	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER6a	ExonRegion	0	0.00	0.00	0.00	0.04	0.03	0.00	0.01
20	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER7a	ExonRegion	0	0.90	1.07	1.80	3.24	0.73	0.00	0.59
22	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	1.22	2.07	0.00	0.00
23	ER8a	ExonRegion	0	31.28	71.01	33.50	74.43	12.72	31.13	59.16
24	E8a_E9a	KnownJunction	0	44.61	81.23	46.73	92.08	15.15	27.55	71.97
25	I8_AR3	ActiveIntronRegion	0	14.19	3.86	18.62	5.93	4.37	1.95	3.97
26	E9_Aa	NovelBoundary	0	3.89	7.01	11.25	7.50	0.85	9.00	6.42
27	ER9a	ExonRegion	0	53.06	122.01	67.28	118.15	25.82	48.26	105.73
28	E9a_E10a	KnownJunction	0	49.84	123.29	88.59	107.69	15.45	38.43	117.88
29	E10_Aa	NovelBoundary	0	4.72	15.82	3.97	4.42	0.00	4.72	3.02
30	ER10a	ExonRegion	0	51.71	135.59	71.70	116.05	31.96	48.24	109.42
31	E10a_E11a	KnownJunction	0	55.74	136.90	85.36	98.72	26.05	60.27	129.00
32	ER11a	ExonRegion	0	56.07	114.27	72.08	106.79	22.80	44.56	101.64
33	E11a_E12a	KnownJunction	0	66.48	102.64	76.28	109.42	27.04	45.75	104.09
34	E12_Aa	NovelBoundary	1	24.53	0.00	28.24	0.00	0.00	0.00	3.11
35	ER12a	ExonRegion	0	65.48	89.88	86.47	103.81	30.03	38.46	93.84
36	E12a_E13a	KnownJunction	0	86.22	73.85	100.88	99.02	34.33	36.61	98.26
37	E12a_E14a	NovelJunction	1	1.80	15.37	2.03	22.43	0.00	3.19	0.60
38	ER13a	ExonRegion	0	87.09	81.73	97.88	91.55	29.86	37.13	81.68
39	E13a_E14a	KnownJunction	0	75.79	78.08	79.35	110.07	20.26	52.13	75.58
40	ER14a	ExonRegion	0	106.09	88.06	123.92	124.35	31.28	52.21	94.38
41	E14_Da	NovelBoundary	0	11.05	45.79	13.13	26.01	3.37	19.51	8.83
42	E14a_E15a	KnownJunction	0	101.68	56.59	122.55	111.40	27.66	34.81	78.16
43	I14	Intron	0	7.67	27.99	8.62	14.95	4.29	8.53	7.49
44	I14_AR1	ActiveIntronRegion	0	10.57	26.33	7.97	14.82	3.45	12.00	4.52
45	I14_SR1	SilentIntronRegion	1	6.90	28.50	8.81	15.02	4.52	7.60	8.31
46	E15_Aa	NovelBoundary	1	13.67	28.64	29.44	23.57	5.19	16.59	15.28
47	ER15a	ExonRegion	0	108.48	66.24	113.95	86.29	28.48	43.28	104.62
48	E15_Da	KnownBoundary	1	12.42	10.53	23.65	7.59	3.94	7.42	22.01
49	ER15b	ExonRegion	0	48.13	19.69	62.92	31.88	5.33	18.30	64.41