Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PKNOX1	Gene	0	73.86	74.87	84.98	92.96	75.37	76.75	50.32
2	291547	Transcript	0	118.53	143.43	139.86	184.38	118.50	136.20	79.98
3	ER1a	ExonRegion	1	18.86	41.18	44.97	60.22	40.05	41.59	13.13
4	E1a_E2a	KnownJunction	0	72.28	60.84	56.14	78.13	106.16	59.58	52.44
5	I1_AR2	ActiveIntronRegion	0	10.62	2.63	8.77	1.30	19.11	6.42	3.52
6	I1_SR3	SilentIntronRegion	0	7.76	5.79	7.46	3.04	22.98	6.01	5.92
7	I1_AR3	ActiveIntronRegion	1	19.26	10.88	8.80	5.42	29.39	9.27	10.94
8	I1_SR5	SilentIntronRegion	0	8.31	6.21	2.34	5.68	17.43	3.26	5.82
9	E2_Aa	NovelBoundary	1	54.81	1.39	28.65	1.19	5.44	0.00	8.07
10	ER2a	ExonRegion	0	85.02	130.74	79.67	132.77	78.87	124.46	67.53
11	E2a_E3a	KnownJunction	1	49.40	156.89	143.83	156.59	27.50	142.12	43.77
12	E3_Aa	NovelBoundary	1	25.02	0.00	69.94	0.00	0.00	3.11	1.46
13	ER3a	ExonRegion	0	123.09	168.73	155.63	181.29	119.21	164.95	87.83
14	E3a_E4a	KnownJunction	0	174.09	178.65	159.42	165.31	203.42	185.48	85.64
15	E3a_E5a	NovelJunction	0	0.00	10.19	6.08	3.31	0.97	6.99	0.89
16	ER4a	ExonRegion	0	184.92	199.29	234.69	237.33	129.62	196.34	84.86
17	E4a_E5a	KnownJunction	0	192.43	173.97	235.23	265.19	125.85	187.73	89.34
18	ER5a	ExonRegion	0	135.33	160.69	183.01	214.94	117.56	142.65	78.20
19	E5a_E6a	KnownJunction	0	59.60	146.31	102.29	200.37	76.10	110.52	74.11
20	ER6a	ExonRegion	0	55.44	148.03	91.52	168.78	76.62	117.50	71.20
21	E6a_E7a	KnownJunction	0	52.67	125.47	95.62	169.05	99.45	111.41	79.18
22	ER7a	ExonRegion	0	57.19	150.72	106.68	176.87	102.43	127.87	91.04
23	E7a_E8a	KnownJunction	1	46.63	147.59	109.79	193.24	185.88	143.22	83.41
24	ER8a	ExonRegion	0	149.02	177.27	186.54	244.91	159.48	154.39	133.93
25	E8a_E9a	KnownJunction	0	128.31	191.44	128.20	255.33	112.06	160.13	91.61
26	ER9a	ExonRegion	0	142.77	165.22	158.86	196.06	144.66	152.41	90.68
27	E9a_E10a	KnownJunction	0	267.19	194.25	283.31	303.15	161.46	217.00	165.14
28	E10_Aa	NovelBoundary	1	23.08	4.89	9.15	2.87	0.00	3.97	2.19
29	ER10a	ExonRegion	0	292.46	149.08	230.47	265.42	229.61	172.13	109.84
30	E10a_E11a	KnownJunction	1	150.08	97.28	91.25	149.43	134.44	95.01	48.05
31	ER11a	ExonRegion	0	52.40	48.47	59.92	57.69	58.16	53.70	38.74
32	IG38_AR1	ActiveIntergenicRegion	0	10.07	7.53	10.01	4.12	5.51	5.39	5.54
33	IG38_AR2	ActiveIntergenicRegion	0	9.62	4.49	6.68	2.42	2.90	2.87	1.73