Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ABCG1	Gene	0	0.95	4.67	10.93	106.37	6.72	45.33	69.37
2	398457	Transcript	0	0.00	0.00	0.08	0.00	0.00	0.00	0.00
3	347800	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	398449	Transcript	0	0.00	0.00	0.00	1.06	0.00	0.00	0.22
5	361802	Transcript	0	0	0	0	0	0	0	0
6	343687	Transcript	0	0.00	1.68	0.17	4.78	0.00	0.31	0.00
7	398437	Transcript	0	0.00	0.00	0.04	0.64	0.00	0.00	0.00
8	340588	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	0.00	0.00	0.32	0.00	0.00	0.00	0.00
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.02	0.00	0.01	0.01
12	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E3_Aa	NovelBoundary	0	47.22	56.85	30.57	63.39	7.98	59.52	37.52
14	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E3_Da	NovelBoundary	1	29.86	12.56	27.09	15.33	3.11	9.81	4.17
16	E3a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	0.00	0.00	0.00	1.06	0.00	0.00	0.22
18	E4_Ab	KnownBoundary	0	0.00	0.00	0.00	2.47	0.00	0.00	0.62
19	ER4b	ExonRegion	0	0.00	0.48	0.24	14.12	0.50	3.92	3.39
20	E4a_E6a	KnownJunction	0	0.00	3.97	1.57	53.72	3.43	16.80	18.47
21	ER5a	ExonRegion	0	0.00	0.41	0.35	3.90	0.00	0.63	0.00
22	E5a_E6a	KnownJunction	0	0.00	2.94	0.00	5.66	0.00	0.00	0.00
23	ER6a	ExonRegion	0	0.16	10.17	9.12	113.98	4.19	58.25	51.22
24	E6a_E10a	KnownJunction	0	0.95	4.68	14.01	154.39	5.30	68.12	76.54
25	ER7a	ExonRegion	0	0.00	0.00	0.09	1.27	0.00	0.00	0.00
26	E7_Ab	KnownBoundary	0	0.00	0.00	0.70	0.00	0.00	0.00	0.00
27	ER7b	ExonRegion	0	0.00	0.00	0.47	0.00	0.00	0.24	0.00
28	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER8a	ExonRegion	0	0.00	0.00	0.79	0.00	0.00	0.00	0.27
30	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E8b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER10a	ExonRegion	0	1.03	8.45	13.38	168.59	5.55	63.55	84.21
36	E10a_E11a	KnownJunction	0	2.22	4.70	12.47	195.22	1.11	54.48	78.42
37	ER11a	ExonRegion	0	1.55	5.64	11.62	163.38	4.40	55.76	91.89
38	E11a_E12a	KnownJunction	0	5.56	7.36	14.37	125.08	4.20	40.41	95.20
39	E11a_E13a	NovelJunction	0	0.00	0.00	0.00	49.60	1.13	17.96	1.78
40	ER12a	ExonRegion	0	4.14	5.41	11.87	139.44	6.02	51.52	114.48
41	E12a_E13a	KnownJunction	0	0.72	2.42	9.59	123.35	5.23	58.72	107.40
42	ER13a	ExonRegion	0	1.86	3.99	15.79	154.84	6.62	60.41	106.91
43	E13a_E14a	KnownJunction	0	3.37	2.63	16.97	143.12	8.48	48.83	95.19
44	E13a_E15a	NovelJunction	0	0.00	0.00	0.57	12.16	0.00	3.27	0.00
45	ER14a	ExonRegion	0	3.16	6.38	16.82	184.51	8.95	73.35	111.05
46	E14a_E15a	KnownJunction	0	3.72	11.93	16.15	228.97	8.37	89.83	135.60
47	ER15a	ExonRegion	0	2.76	11.92	23.91	229.80	12.99	86.21	150.60
48	E15a_E16a	KnownJunction	0	2.60	6.73	18.60	178.26	10.26	69.55	118.69
49	ER16a	ExonRegion	0	1.53	7.53	16.51	170.43	9.69	67.38	118.32
50	E16_Da	KnownBoundary	0	0.00	2.60	5.29	115.46	5.05	48.32	56.90
51	E16a_E17a	KnownJunction	1	0.90	3.18	3.64	41.88	4.08	13.53	74.12
52	ER16b	ExonRegion	0	0.68	5.40	6.51	140.53	8.62	43.49	61.88
53	E16b_E17a	KnownJunction	0	1.03	9.20	6.04	156.32	10.81	41.57	62.51
54	ER17a	ExonRegion	0	2.08	7.03	14.10	189.28	12.08	71.59	127.63
55	E17a_E18a	KnownJunction	0	1.00	5.62	10.42	176.34	17.40	62.10	124.04
56	ER18a	ExonRegion	0	2.36	7.71	15.59	210.83	16.35	82.45	161.28
57	E18a_E19a	KnownJunction	1	2.69	5.31	7.13	187.12	11.64	86.19	175.99
58	ER19a	ExonRegion	1	0.75	6.99	12.02	187.82	15.62	83.83	170.87
59	E19a_E20a	KnownJunction	0	0.73	11.61	22.16	190.86	14.09	70.67	168.14
60	E19a_E21a	NovelJunction	0	0.00	0.00	0.00	5.58	0.00	10.10	0.89
61	ER20a	ExonRegion	0	0.92	8.30	12.43	154.92	14.81	55.59	136.31
62	E20a_E21a	KnownJunction	0	0.00	4.20	11.08	98.45	9.45	47.49	100.56
63	ER21a	ExonRegion	0	1.10	5.27	17.24	160.02	12.22	66.20	135.14
64	E21_Da	NovelBoundary	1	0.00	0.00	0.00	37.11	0.00	4.34	0.00
65	E21a_E22a	KnownJunction	0	1.79	8.98	20.51	191.72	13.60	67.32	147.14
66	I21_AR1	ActiveIntronRegion	0	0.00	1.47	0.94	22.61	0.54	5.17	0.00
67	I21_AR2	ActiveIntronRegion	0	0.20	0.59	0.91	22.37	0.64	8.64	0.17
68	ER22a	ExonRegion	0	1.28	6.67	20.86	156.19	11.30	75.07	94.78
69	ER22b	ExonRegion	0	0.00	0.00	0.34	6.86	0.81	11.03	4.05
70	IG25	Intergenic	0	0.15	2.15	9.00	85.91	3.07	32.29	19.43
71	IG25_AR1	ActiveIntergenicRegion	0	0.00	2.43	6.36	72.81	3.05	26.19	16.31
72	IG25_SR1	SilentIntergenicRegion	0	0.00	1.21	5.44	54.20	4.59	15.12	9.15
73	IG25_AR2	ActiveIntergenicRegion	0	0.19	2.08	9.78	90.02	3.06	34.23	20.45