Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MX1	Gene	0	36.12	51.73	21.53	60.93	20.43	108.86	107.46
2	398600	Transcript	0	0.30	0.41	1.12	0.10	1.94	1.73	1.81
3	398598	Transcript	0	10.47	6.53	2.72	7.13	3.32	8.08	27.28
4	288383	Transcript	0	1.96	0.85	0.89	2.01	0.68	3.42	1.95
5	IG16_AR2	ActiveIntergenicRegion	0	0.70	0.00	0.31	0.57	0.25	10.51	0.00
6	ER1a	ExonRegion	0	0.00	0.00	0.17	0.62	0.83	2.88	0.19
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.88	0.00	0.00	1.66	0.59
8	ER2a	ExonRegion	0	0.68	0.10	0.82	0.00	2.35	1.40	2.36
9	E2_Da	NovelBoundary	0	49.95	40.33	66.28	75.48	6.13	57.51	42.39
10	E2a_E3a	KnownJunction	0	0.00	1.37	2.17	0.00	2.24	1.66	3.73
11	ER3a	ExonRegion	0	1.12	1.01	2.13	0.00	4.18	1.71	2.76
12	E3a_E5a	KnownJunction	0	0.00	0.00	0.55	0.00	2.01	1.10	1.22
13	ER4a	ExonRegion	0	3.70	3.48	0.53	3.74	1.82	4.57	12.14
14	E4a_E5a	KnownJunction	0	17.24	9.59	4.91	10.51	4.82	11.58	42.42
15	E4a_E6a	NovelJunction	0	10.28	13.19	2.41	5.63	5.16	5.68	12.68
16	ER5a	ExonRegion	0	11.10	17.02	4.17	16.87	7.83	30.61	45.59
17	E5a_E6a	KnownJunction	0	5.79	10.90	5.79	7.67	1.87	26.99	16.58
18	ER6a	ExonRegion	0	26.55	36.54	13.18	39.00	11.27	84.08	75.59
19	E6a_E7a	KnownJunction	0	34.13	66.41	19.70	50.63	26.72	89.38	124.41
20	E7_Aa	NovelBoundary	1	13.65	1.63	9.24	1.68	2.03	0.00	1.46
21	ER7a	ExonRegion	0	51.84	62.84	25.51	78.67	35.42	131.13	136.54
22	E7a_E8b	KnownJunction	0	50.70	56.27	29.17	108.23	20.01	152.22	134.04
23	E8_Aa	NovelBoundary	0	189.86	94.92	207.35	107.93	128.77	127.89	167.41
24	ER8a	ExonRegion	0	3.07	0.52	1.77	1.04	0.41	2.49	1.13
25	E8_Ab	KnownBoundary	0	8.53	4.60	1.22	5.91	3.27	11.58	9.10
26	ER8b	ExonRegion	0	51.66	74.54	28.95	107.57	22.02	166.53	147.56
27	E8a_E9a	KnownJunction	0	55.08	92.66	20.31	96.12	22.18	146.54	135.86
28	ER9a	ExonRegion	0	39.84	65.86	20.43	81.78	22.77	131.82	123.18
29	E9_Da	KnownBoundary	0	29.47	70.46	24.10	85.39	21.76	156.73	116.57
30	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER9b	ExonRegion	0	22.38	67.73	18.77	69.85	20.81	128.00	112.49
32	E9b_E10a	KnownJunction	0	27.47	71.06	21.76	73.61	16.69	120.20	104.81
33	ER10a	ExonRegion	0	42.29	103.04	35.40	97.65	24.78	171.44	161.08
34	E10a_E11a	KnownJunction	0	44.08	91.79	41.67	101.92	35.96	179.13	158.92
35	ER11a	ExonRegion	0	44.08	103.76	42.63	102.23	31.68	162.36	172.40
36	E11a_E12a	KnownJunction	0	37.37	112.52	31.67	91.60	24.53	166.05	156.79
37	ER12a	ExonRegion	0	45.03	91.78	33.91	92.09	33.69	135.27	168.95
38	E12a_E13a	KnownJunction	0	51.62	87.41	33.61	92.73	31.93	133.11	169.02
39	ER13a	ExonRegion	0	60.13	93.54	34.51	96.52	32.15	150.91	190.36
40	E13a_E14a	KnownJunction	0	54.69	71.64	31.74	90.43	36.22	107.12	166.69
41	I13_SR2	SilentIntronRegion	0	13.66	3.40	7.52	6.36	0.19	7.25	1.71
42	ER14a	ExonRegion	0	56.41	64.69	28.98	73.89	32.31	133.96	165.25
43	E14a_E15a	KnownJunction	0	55.78	56.75	27.48	65.53	31.86	132.66	178.15
44	ER15a	ExonRegion	0	60.40	69.31	38.74	96.27	34.17	145.35	179.06
45	E15a_E16a	KnownJunction	0	76.94	67.99	37.08	67.67	39.44	130.89	148.72
46	ER16a	ExonRegion	0	61.72	63.30	39.76	86.41	31.94	147.71	168.64
47	E16a_E17a	KnownJunction	0	75.14	30.61	36.67	51.09	32.00	109.16	109.69
48	E16a_E18a	NovelJunction	0	1.74	7.64	0.78	7.31	0.90	2.28	4.63
49	E16a_E19a	NovelJunction	1	0.00	0.00	0.00	3.36	0.00	8.66	0.00
50	I16_SR2	SilentIntronRegion	0	13.36	8.59	8.13	12.90	1.49	13.95	9.19
51	E17_Aa	NovelBoundary	0	12.02	7.09	6.52	7.45	1.11	5.39	12.12
52	ER17a	ExonRegion	0	61.60	39.62	36.85	61.97	27.82	127.67	139.03
53	E17_Da	NovelBoundary	1	4.06	2.73	11.07	10.54	1.18	6.99	0.89
54	E17a_E18a	KnownJunction	0	66.64	33.84	30.58	50.71	19.96	116.87	134.99
55	ER18a	ExonRegion	0	60.13	48.29	33.60	54.40	22.78	136.42	135.00
56	E18a_E19a	KnownJunction	0	41.82	57.46	26.43	43.54	27.96	129.58	115.94
57	ER19a	ExonRegion	0	76.90	86.98	43.24	102.42	39.42	206.00	188.07
58	E19a_E20a	KnownJunction	0	62.07	87.17	49.78	124.13	49.91	203.81	218.17
59	E20_Aa	NovelBoundary	1	23.70	0.00	20.15	1.68	0.00	2.73	3.28
60	ER20a	ExonRegion	0	45.65	72.52	22.29	90.96	26.83	172.84	142.54
61	ER20b	ExonRegion	0	2.82	2.02	0.90	4.99	1.62	7.76	4.72
62	IG17	Intergenic	0	1.96	4.55	2.21	7.96	0.30	11.11	1.68
63	IG17_SR1	SilentIntergenicRegion	0	1.20	3.62	2.27	6.09	0.49	11.57	1.71
64	IG17_SR2	SilentIntergenicRegion	0	1.99	6.13	2.54	10.32	0.39	12.68	2.09
65	IG17_AR2	ActiveIntergenicRegion	0	2.64	3.82	2.86	8.26	0.27	12.15	1.11
66	IG17_SR4	SilentIntergenicRegion	0	2.12	2.33	0.65	2.79	0.00	8.20	1.92