Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SNF1LK	Gene	0	493.62	396.24	403.52	351.15	18.20	651.50	361.66
2	270162	Transcript	0	547.33	528.28	478.60	452.31	23.97	777.22	417.36
3	IG43_SR10	SilentIntergenicRegion	0	0.25	0.98	1.89	0.57	0.68	0.00	7.41
4	IG43_AR6	ActiveIntergenicRegion	0	0.16	0.00	1.96	0.50	0.08	0.65	8.10
5	ER1a	ExonRegion	0	13.99	73.35	19.37	76.89	1.37	107.68	36.16
6	E1a_E2a	KnownJunction	0	25.08	86.91	23.22	81.06	0.00	124.19	42.56
7	E1a_E3a	NovelJunction	1	4.37	1.29	1.51	13.49	0.00	2.04	1.40
8	ER2a	ExonRegion	0	540.22	302.85	389.15	277.28	18.61	559.32	219.98
9	E2a_E3a	KnownJunction	1	1167.46	626.18	834.56	564.28	43.82	1242.17	389.83
10	ER3a	ExonRegion	0	1439.46	913.59	1232.87	866.14	50.62	1730.02	658.30
11	E3a_E4a	KnownJunction	0	1207.47	866.62	1095.02	890.21	64.16	1582.71	746.18
12	I3_AR2	ActiveIntronRegion	0	122.90	14.58	78.85	6.40	1.62	10.71	33.59
13	ER4a	ExonRegion	0	1489.59	991.49	1282.81	908.18	62.65	1585.08	752.57
14	E4a_E5a	KnownJunction	0	1470.82	1003.75	1256.80	873.50	49.75	1504.62	662.74
15	ER5a	ExonRegion	0	746.01	761.40	813.78	662.93	38.72	1131.49	626.46
16	E5a_E6a	KnownJunction	0	616.01	582.94	597.07	426.14	25.01	862.63	457.72
17	ER6a	ExonRegion	0	349.77	512.07	375.94	381.49	22.40	697.84	412.63
18	E6a_E7a	KnownJunction	0	248.41	500.10	308.04	359.09	29.74	681.89	411.48
19	ER7a	ExonRegion	0	219.99	493.14	261.04	376.72	14.73	655.95	380.60
20	E7a_E8a	KnownJunction	0	230.72	515.26	235.30	423.08	16.04	649.33	396.11
21	ER8a	ExonRegion	0	452.38	536.90	350.27	459.78	16.66	673.93	442.18
22	E8a_E9a	KnownJunction	0	900.51	721.33	613.60	585.68	25.84	801.47	595.89
23	E8a_E10a	NovelJunction	1	11.22	24.46	31.54	38.31	0.00	116.61	24.26
24	ER9a	ExonRegion	0	555.00	642.27	411.79	486.77	16.56	743.83	473.95
25	E9a_E10a	KnownJunction	0	573.33	505.91	444.69	397.07	22.64	581.07	438.54
26	ER10a	ExonRegion	0	430.30	502.22	361.90	400.58	25.57	669.11	485.97
27	E10a_E11a	KnownJunction	0	371.53	539.14	377.48	468.22	17.13	752.19	566.13
28	ER11a	ExonRegion	0	206.33	426.86	216.62	346.30	8.95	543.69	302.69
29	E11a_E12a	KnownJunction	0	203.42	402.87	240.16	352.05	21.23	474.22	289.60
30	E11a_E13a	NovelJunction	1	2.70	7.20	7.27	15.74	0.00	38.51	0.60
31	ER12a	ExonRegion	0	226.23	357.84	227.19	326.51	9.31	473.06	292.44
32	E12a_E13a	KnownJunction	0	248.46	460.04	216.92	381.04	12.68	592.54	322.23
33	ER13a	ExonRegion	0	156.93	335.34	151.79	293.93	6.38	493.89	209.28
34	E13a_E14a	KnownJunction	0	152.45	281.26	175.89	249.21	8.94	458.22	306.82
35	ER14a	ExonRegion	0	535.93	322.01	408.96	298.22	17.73	612.91	349.70
36	IG42_AR14	ActiveIntergenicRegion	0	0.15	0.54	4.14	4.98	0.12	15.73	3.47
37	IG42_AR13	ActiveIntergenicRegion	0	0.10	0.70	5.71	9.30	0.13	32.15	6.40
38	IG42_SR12	SilentIntergenicRegion	0	0.15	0.00	2.83	3.56	0.00	12.42	1.74
39	IG42_AR12	ActiveIntergenicRegion	0	0.00	0.00	2.21	2.80	0.10	10.82	0.82
40	IG42_AR6	ActiveIntergenicRegion	0	11.64	0.00	0.81	0.00	0.00	0.00	0.54
41	IG42_SR2	SilentIntergenicRegion	0	10.04	0.22	1.25	0.08	0.00	0.00	0.28