Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	COL6A2	Gene	0	444.52	1220.56	156.91	355.83	143.12	1533.53	2.32
2	357838	Transcript	0	0	0	0	0	0	0	0
3	310645	Transcript	0	0	0	0	0	0	0	0
4	300527	Transcript	0	547.05	1119.18	195.66	469.77	305.99	1770.92	2.82
5	409416	Transcript	0	25.03	39.53	7.82	16.08	12.24	61.90	0.11
6	397763	Transcript	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	323.34	599.15	110.94	178.41	156.07	873.98	1.77
8	E1a_E2b	KnownJunction	0	705.38	1353.06	244.01	435.73	357.53	1942.45	4.43
9	ER2a	ExonRegion	0	25.03	39.53	7.82	16.08	12.24	61.90	0.11
10	E2_Ab	KnownBoundary	0	5.77	1.63	1.32	2.93	0.00	0.00	0.00
11	ER2b	ExonRegion	0	327.70	1200.59	124.00	323.05	96.76	1633.25	2.13
12	E2a_E3a	KnownJunction	0	425.84	1677.22	139.52	465.48	62.43	2496.61	0.66
13	ER3a	ExonRegion	0	470.09	1643.95	177.36	433.44	153.78	2107.11	2.24
14	E3a_E4a	KnownJunction	0	370.65	1474.85	148.92	370.58	146.55	1624.82	2.31
15	E4a_E5a	KnownJunction	0	389.94	1257.40	156.25	334.44	111.14	1612.73	1.71
16	ER4a	ExonRegion	0	532.01	1923.18	219.70	510.96	163.40	2293.61	2.89
17	ER5a	ExonRegion	0	522.89	1700.71	197.75	487.30	128.79	2180.03	3.07
18	E5a_E6a	KnownJunction	0	442.12	1564.70	154.81	479.27	106.55	2135.14	4.90
19	ER6a	ExonRegion	0	494.16	1659.58	177.15	497.47	121.55	2251.63	3.02
20	E6a_E7a	KnownJunction	0	401.66	1285.17	157.80	366.87	122.73	1639.23	1.28
21	E7_Aa	NovelBoundary	0	154.53	2.55	50.80	1.35	0.00	0.00	0.00
22	ER7a	ExonRegion	0	464.96	1354.43	188.18	406.68	112.59	1859.86	1.14
23	E7a_E8a	KnownJunction	0	329.21	856.40	141.48	261.24	77.27	1255.62	0.86
24	E8a_E9a	KnownJunction	0	201.50	561.71	77.76	145.83	75.59	824.58	0.00
25	ER8a	ExonRegion	0	448.34	1260.75	195.94	383.33	97.12	1809.89	1.15
26	E9a_E10a	KnownJunction	0	289.95	925.83	134.06	268.31	110.63	1389.67	1.61
27	ER9a	ExonRegion	0	437.98	1277.08	186.33	365.08	109.48	1797.86	1.22
28	ER10a	ExonRegion	0	427.13	1227.87	167.48	341.78	113.85	1608.92	2.74
29	E10a_E11a	KnownJunction	0	345.01	977.27	134.06	272.08	98.71	1126.77	3.10
30	ER11a	ExonRegion	0	403.41	987.61	131.76	283.87	87.24	1214.83	2.99
31	E11a_E12a	KnownJunction	0	345.00	857.71	99.70	250.67	60.49	1133.17	0.85
32	ER12a	ExonRegion	0	321.41	895.85	94.04	226.27	49.99	1147.22	0.45
33	E12a_E13a	KnownJunction	0	247.36	828.08	87.33	204.13	37.81	1049.61	0.00
34	ER13a	ExonRegion	0	312.35	900.00	103.78	233.87	60.10	1100.30	1.36
35	E13a_E14a	KnownJunction	0	355.83	888.63	139.95	249.29	85.94	1089.33	4.07
36	ER14a	ExonRegion	0	334.00	895.39	112.55	243.34	59.27	1089.24	2.47
37	E14a_E15a	KnownJunction	0	298.15	772.54	93.88	220.93	29.05	1027.23	0.00
38	ER15a	ExonRegion	0	264.68	766.67	84.87	238.11	45.48	1005.30	0.87
39	E15a_E16a	KnownJunction	0	296.66	858.47	115.28	238.75	55.95	1105.22	2.06
40	ER16a	ExonRegion	0	369.20	902.20	129.10	243.41	64.43	1261.49	2.52
41	E16a_E17a	KnownJunction	0	437.83	1000.36	158.09	244.39	80.73	1391.82	2.35
42	ER17a	ExonRegion	0	413.43	1044.10	155.83	280.67	82.89	1464.21	3.35
43	E17a_E18a	KnownJunction	0	434.87	1065.88	154.47	290.96	81.72	1483.88	3.12
44	ER18a	ExonRegion	0	461.89	1080.24	176.30	291.89	70.26	1383.39	2.29
45	E18a_E19a	KnownJunction	0	424.34	1028.61	179.34	268.55	63.49	1363.81	1.78
46	ER19a	ExonRegion	0	472.93	1157.26	190.44	298.32	76.79	1579.28	1.60
47	E19a_E20a	KnownJunction	0	367.51	888.66	162.96	226.24	66.37	1236.35	1.58
48	ER20a	ExonRegion	0	417.69	1087.36	164.28	276.17	62.56	1355.92	1.56
49	E20a_E21a	KnownJunction	0	325.15	924.68	132.74	224.75	50.44	981.62	2.21
50	ER21a	ExonRegion	0	451.74	1234.37	175.22	341.67	96.33	1331.53	3.58
51	E21a_E22a	KnownJunction	0	520.89	1314.70	206.54	376.76	124.79	1512.93	3.86
52	ER22a	ExonRegion	0	516.84	1302.10	210.19	348.38	108.78	1531.74	2.89
53	E22a_E23a	KnownJunction	0	413.81	1115.14	191.86	308.16	124.81	1353.68	2.31
54	ER23a	ExonRegion	0	524.14	1315.52	212.40	313.30	149.53	1660.58	2.51
55	E23a_E24a	KnownJunction	0	388.14	990.04	148.80	225.34	182.32	1293.49	0.89
56	E23a_E25a	NovelJunction	0	13.90	133.54	9.37	122.24	2.88	168.68	0.00
57	ER24a	ExonRegion	0	680.97	1675.71	253.05	397.35	236.11	1912.61	3.64
58	E24a_E25a	KnownJunction	0	726.71	1683.39	259.92	423.79	239.20	1767.42	4.53
59	ER25a	ExonRegion	0	884.12	2554.04	338.96	700.99	302.03	2720.07	7.04
60	E25a_E26a	KnownJunction	0	954.20	2921.02	327.93	802.68	225.16	3214.12	9.13
61	ER26a	ExonRegion	0	960.18	2539.29	338.67	741.71	336.78	2877.87	5.31
62	E26a_E27a	KnownJunction	0	921.18	2386.89	309.51	683.51	424.33	2795.08	5.83
63	ER27a	ExonRegion	0	1002.93	2459.99	338.22	781.11	433.42	3011.05	4.43
64	E27a_E28a	KnownJunction	1	27.37	121.53	1.78	17.28	6.55	36.85	0.00
65	E27a_E28b	KnownJunction	0	133.74	431.80	26.27	72.58	28.56	407.92	0.00
66	E27a_E29a	KnownJunction	0	616.03	1219.68	234.06	526.57	407.92	1930.92	3.54
67	ER28a	ExonRegion	0	31.88	147.22	3.52	10.62	6.25	37.66	0.00
68	E28_Ab	KnownBoundary	0	31.79	111.55	0.79	4.33	2.84	18.68	0.00
69	ER28b	ExonRegion	0	189.70	610.97	40.83	91.45	20.59	482.02	0.71
70	E28_Da	KnownBoundary	0	119.10	392.68	26.36	67.16	13.85	347.70	0.67
71	ER28c	ExonRegion	0	77.40	285.83	25.45	48.13	8.83	285.70	0.45
72	ER28d	ExonRegion	0	2.05	7.69	3.39	4.99	0.81	13.08	0.00
73	I28	Intron	0	47.67	91.54	32.17	46.59	7.10	160.31	0.35
74	I28_AR1	ActiveIntronRegion	0	47.69	91.58	32.19	46.61	7.10	160.38	0.35
75	E29_Aa	NovelBoundary	0	279.41	90.93	95.30	45.13	3.02	148.63	0.00
76	ER29a	ExonRegion	0	478.08	1018.68	157.25	412.98	204.06	1610.92	2.10