Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PRDM15	Gene	0	13.77	13.73	22.33	21.50	17.55	10.49	10.23
2	380489	Transcript	0	0.00	1.96	1.71	0.00	0.34	1.02	0.17
3	269844	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.09
4	398548	Transcript	0	12.20	8.85	21.66	17.69	18.42	9.47	10.55
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1b	ExonRegion	0	1.34	3.22	3.46	5.52	2.47	1.42	1.53
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1a_E8a	KnownJunction	0	7.29	9.20	18.35	18.45	13.56	7.75	10.13
9	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	0.35	0.00	0.00	0.00	0.00	0.56	0.00
12	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER4a	ExonRegion	0	0.46	0.00	0.39	0.00	1.59	0.00	0.40
14	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER5a	ExonRegion	0	0.50	0.00	0.00	0.00	1.57	0.00	0.00
16	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.50	0.00	0.00
18	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER7a	ExonRegion	0	1.24	0.00	0.27	1.00	0.22	0.00	0.81
20	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER8a	ExonRegion	0	8.09	13.73	16.35	18.81	8.86	5.60	7.89
22	E8a_E9a	KnownJunction	0	6.11	11.30	11.74	11.73	7.31	2.89	2.29
23	ER9a	ExonRegion	0	4.71	20.79	12.73	19.85	3.89	8.18	3.31
24	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E9a_E11a	KnownJunction	0	6.93	25.69	20.35	40.15	3.43	17.15	8.05
26	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.26
27	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER11a	ExonRegion	0	13.20	34.69	31.28	42.53	16.23	15.46	10.55
29	E11a_E12a	KnownJunction	0	7.41	32.89	15.85	38.88	15.84	14.98	6.58
30	ER12a	ExonRegion	1	16.36	31.60	25.17	38.73	11.53	10.17	9.86
31	E12a_E13a	KnownJunction	1	33.58	26.01	28.19	17.96	13.74	4.23	7.93
32	E12a_E14a	NovelJunction	0	1.03	8.67	5.71	6.26	0.99	2.84	0.00
33	ER13a	ExonRegion	1	28.64	26.51	30.72	31.65	9.92	9.23	7.86
34	E13a_E14a	KnownJunction	0	23.33	32.02	39.13	30.88	9.13	17.04	12.61
35	ER14a	ExonRegion	1	24.63	25.86	43.77	27.07	10.15	15.51	9.33
36	E14a_E15a	KnownJunction	0	12.50	31.16	33.35	23.81	8.05	18.25	9.43
37	ER15a	ExonRegion	0	16.35	23.42	34.75	27.20	8.74	17.05	9.23
38	E15a_E16a	KnownJunction	0	21.21	28.24	31.46	25.87	13.99	14.69	13.13
39	ER16a	ExonRegion	0	12.67	20.58	22.49	32.69	16.68	11.28	14.16
40	E16a_E17a	KnownJunction	0	13.37	25.72	20.36	41.58	22.18	14.26	12.64
41	ER17a	ExonRegion	0	12.15	20.33	30.35	45.31	17.85	18.34	15.66
42	E17a_E18a	KnownJunction	1	7.64	24.14	26.50	45.49	16.83	18.49	13.11
43	ER18a	ExonRegion	0	9.59	25.61	22.00	42.89	14.96	13.92	10.98
44	E18a_E19a	KnownJunction	0	0.00	5.86	3.89	0.00	1.13	2.60	0.57
45	E18a_E20a	KnownJunction	0	8.66	15.50	18.25	33.86	11.62	16.83	11.77
46	ER19a	ExonRegion	0	0.00	1.96	2.94	0.00	0.24	1.49	0.10
47	E19a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER20a	ExonRegion	0	6.45	17.88	20.04	30.23	20.54	13.90	13.81
49	E20_Ab	KnownBoundary	1	5.01	18.00	21.41	24.14	12.10	10.05	13.93
50	ER20b	ExonRegion	1	6.63	21.56	22.94	27.40	14.05	5.44	8.97
51	E20a_E21a	KnownJunction	1	8.65	17.39	16.99	31.86	11.76	4.29	8.53
52	ER21a	ExonRegion	1	10.16	15.95	17.08	24.45	15.32	4.13	8.26
53	E21a_E22a	KnownJunction	1	11.37	16.60	21.00	16.69	17.27	3.97	6.99
54	ER22a	ExonRegion	1	16.37	13.97	27.30	23.87	18.42	4.89	8.44
55	E22a_E24a	KnownJunction	0	22.75	19.97	18.54	19.40	18.56	8.50	11.58
56	ER23a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER24a	ExonRegion	0	32.87	21.88	41.59	41.92	27.98	16.63	18.96
58	E24a_E25a	KnownJunction	0	22.70	15.08	32.76	32.92	33.20	15.54	12.70
59	ER25a	ExonRegion	0	21.42	16.54	28.69	26.91	25.51	17.31	17.67
60	E25a_E26a	KnownJunction	0	16.67	23.93	30.41	31.10	22.29	10.45	7.01
61	ER26a	ExonRegion	0	13.02	18.83	24.35	27.74	15.05	15.68	9.92
62	E26a_E27a	KnownJunction	0	10.36	22.78	24.10	37.47	15.15	14.98	14.76
63	ER27a	ExonRegion	0	15.59	24.28	23.70	31.90	20.93	10.85	17.72
64	E27a_E28a	KnownJunction	0	15.32	22.07	20.92	39.23	26.49	9.35	13.11
65	ER28a	ExonRegion	0	19.24	27.87	26.45	37.66	23.27	15.28	22.68
66	E28a_E29a	KnownJunction	0	14.25	23.70	23.44	41.40	28.17	13.45	16.31
67	E28a_E31a	NovelJunction	0	1.64	10.14	4.87	21.73	0.00	10.32	2.15
68	ER29a	ExonRegion	1	11.88	26.48	30.75	28.80	31.05	6.86	15.73
69	E29a_E30a	KnownJunction	1	9.78	22.49	21.97	21.00	19.09	4.53	11.04
70	ER30a	ExonRegion	1	11.97	22.67	23.87	32.24	19.85	2.70	13.38
71	E30a_E31a	KnownJunction	1	7.53	19.28	25.36	25.90	20.52	5.68	11.61
72	ER31a	ExonRegion	0	10.81	23.98	25.88	29.40	29.62	10.04	10.03
73	E31a_E32a	KnownJunction	0	13.75	21.15	25.22	29.99	27.41	14.50	7.88
74	ER32a	ExonRegion	0	14.89	28.77	31.59	43.29	26.03	22.07	14.87
75	E32a_E33a	KnownJunction	0	22.23	37.17	47.28	45.81	55.63	26.83	20.97
76	ER33a	ExonRegion	0	15.42	17.76	27.15	32.15	25.31	20.28	17.10
77	E33_Da	KnownBoundary	0	7.71	9.01	22.39	20.24	19.13	17.50	12.38
78	ER33b	ExonRegion	0	17.11	8.50	24.97	16.93	23.29	11.20	10.97