Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CRYZL1	Gene	0	36.36	22.20	34.79	15.70	50.65	12.25	32.49
2	290244	Transcript	0	0.10	0.00	0.76	0.76	0.48	0.00	0.44
3	381554	Transcript	0	0.86	2.14	6.32	1.07	5.63	0.64	6.97
4	361534	Transcript	0	8.29	3.64	5.14	3.04	12.46	4.49	8.35
5	381540	Transcript	0	5.23	8.79	7.58	2.75	9.76	2.88	8.70
6	343087	Transcript	0	38.66	30.36	26.17	18.40	44.36	16.73	16.82
7	399442	Transcript	0	11.88	5.23	6.21	3.38	14.72	3.85	3.80
8	ER1a	ExonRegion	0	0.20	0.00	0.00	0.00	0.00	0.00	0.00
9	E1_Ab	KnownBoundary	0	0.73	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1b	ExonRegion	0	1.04	0.00	0.29	0.16	0.13	0.00	0.00
11	E1_Ac	KnownBoundary	0	0.00	0.00	0.89	0.00	0.00	0.00	0.00
12	E1_Ad	KnownBoundary	0	0.98	0.00	0.00	0.00	1.18	0.00	0.00
13	ER1c	ExonRegion	0	0.77	0.71	0.68	1.25	0.81	0.00	0.17
14	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	1.60	0.00	0.00	0.79
15	E1_Af	KnownBoundary	0	33.63	9.90	27.36	5.42	38.96	1.07	21.98
16	ER1d	ExonRegion	0	7.28	6.66	7.37	4.14	22.90	0.83	10.63
17	ER1e	ExonRegion	1	29.97	23.08	29.80	14.96	55.88	4.90	45.87
18	ER1f	ExonRegion	1	50.91	30.55	55.11	19.95	68.92	7.20	56.41
19	E1_Da	NovelBoundary	1	7.91	0.00	12.39	1.60	0.88	0.00	0.72
20	E1a_E2a	KnownJunction	0	1.03	0.00	1.52	3.22	0.99	0.00	0.00
21	E1a_E4a	KnownJunction	0	111.92	44.11	95.03	24.71	31.74	12.11	89.64
22	ER2a	ExonRegion	0	1.38	0.00	0.59	2.40	2.31	0.00	0.40
23	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	0.00	0.00
25	ER3a	ExonRegion	1	23.76	10.45	12.42	6.75	29.44	7.71	7.60
26	ER4a	ExonRegion	0	37.11	29.90	40.30	18.46	29.93	12.67	38.70
27	E4a_E5a	KnownJunction	0	17.92	36.25	23.45	18.67	24.23	13.83	20.34
28	ER5a	ExonRegion	0	96.41	45.46	99.73	32.84	37.51	26.96	69.02
29	E5a_E6a	KnownJunction	0	216.79	55.22	171.12	36.00	98.83	24.60	104.39
30	ER6a	ExonRegion	0	111.37	54.34	101.77	32.13	173.56	22.96	88.65
31	E6a_E7a	KnownJunction	0	36.65	37.54	54.87	23.79	85.32	18.41	57.83
32	E6a_E9a	KnownJunction	0	0.00	0.00	1.52	1.52	0.97	0.00	0.89
33	ER7a	ExonRegion	0	49.73	63.15	74.02	32.31	80.28	29.02	75.46
34	E7a_E8a	KnownJunction	0	4.36	12.03	1.22	3.12	3.27	1.66	2.79
35	E7a_E9a	KnownJunction	0	40.06	53.73	62.73	28.01	91.57	36.98	58.20
36	ER8a	ExonRegion	1	72.97	48.69	51.12	33.69	85.45	31.81	30.85
37	ER9a	ExonRegion	0	45.73	60.30	63.12	34.81	104.73	27.47	68.07
38	E9a_E10a	KnownJunction	0	53.56	59.93	63.39	34.68	126.63	16.29	81.52
39	ER10a	ExonRegion	0	68.27	65.09	84.34	38.18	119.42	25.42	100.47
40	E10a_E11a	KnownJunction	0	71.93	68.31	74.01	41.56	117.87	28.89	108.65
41	ER11a	ExonRegion	0	84.12	72.09	90.10	36.86	166.50	24.17	106.78
42	E11a_E12a	KnownJunction	0	78.53	31.60	81.02	22.08	126.56	9.14	72.89
43	E12_Aa	NovelBoundary	0	7.11	10.11	11.74	7.86	16.83	3.59	8.08
44	ER12a	ExonRegion	0	91.22	43.61	79.56	34.29	139.61	20.06	89.24
45	E12a_E13a	KnownJunction	0	86.62	28.48	78.94	29.42	134.14	29.24	75.30
46	E12a_E14a	NovelJunction	1	3.67	8.64	3.99	9.29	4.31	0.00	4.87
47	ER13a	ExonRegion	0	81.08	38.83	67.23	35.76	131.14	20.59	86.37
48	E13a_E14a	KnownJunction	0	56.43	38.46	40.94	27.82	86.91	23.48	61.17
49	ER14a	ExonRegion	0	50.92	30.80	50.83	26.14	90.78	19.88	62.65
50	E14a_E15a	KnownJunction	1	14.77	5.88	4.02	1.49	20.66	9.97	14.75
51	E14a_E16a	KnownJunction	0	2.00	6.41	1.74	1.52	4.45	1.34	3.51
52	E14a_E16b	KnownJunction	0	26.30	13.90	33.60	11.57	46.89	9.65	34.83
53	ER15a	ExonRegion	0	10.11	5.04	11.40	5.96	16.72	3.51	10.30
54	I15	Intron	1	7.36	5.22	10.09	3.25	13.00	4.52	12.69
55	I15_SR1	SilentIntronRegion	1	5.49	2.34	8.47	1.44	8.23	2.23	8.29
56	I15_AR1	ActiveIntronRegion	1	10.59	10.16	12.91	6.36	21.21	8.46	20.25
57	ER16a	ExonRegion	0	8.45	11.18	13.41	3.99	15.06	4.41	13.90
58	ER16b	ExonRegion	0	35.02	20.71	45.01	11.64	69.81	14.28	53.16
59	E16a_E17a	KnownJunction	0	33.03	18.89	45.27	18.07	87.88	23.07	51.18
60	E17_Aa	NovelBoundary	1	17.47	0.00	19.93	0.00	0.00	0.00	0.00
61	ER17a	ExonRegion	0	46.04	21.16	49.45	15.10	48.55	15.37	38.33
62	E17_Da	KnownBoundary	0	11.78	2.10	10.79	4.06	5.07	2.68	17.86
63	ER17b	ExonRegion	0	6.48	2.22	10.44	4.36	5.17	2.68	12.40
64	E17_Db	KnownBoundary	1	2.25	4.36	16.89	4.58	9.75	1.31	10.45
65	ER17c	ExonRegion	0	0.86	2.14	6.32	1.07	5.63	0.64	6.97