Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	USP16	Gene	0	286.03	248.62	263.56	204.24	99.47	255.97	125.11
2	399976	Transcript	0	0	0	0	0	0	0	0
3	334352	Transcript	0	0.71	3.19	0.42	6.25	0.44	12.68	0.00
4	399975	Transcript	0	56.63	71.37	72.29	46.38	22.81	50.66	29.93
5	399973	Transcript	0	2.22	2.28	2.55	0.65	0.28	0.00	1.20
6	ER1a	ExonRegion	0	0.83	0.00	1.35	0.00	0.06	0.66	0.00
7	E1_Ac	KnownBoundary	0	9.91	4.44	8.74	5.20	1.11	6.51	0.00
8	ER1b	ExonRegion	0	3.19	2.92	2.51	2.03	1.14	4.50	0.15
9	ER1c	ExonRegion	0	103.09	130.70	113.18	116.75	45.99	117.88	71.65
10	E1a_E2a	KnownJunction	0	0.00	1.10	0.00	3.74	0.00	7.50	0.00
11	E1a_E3a	KnownJunction	0	2.60	2.10	3.12	1.08	0.00	0.00	1.99
12	E1a_E4a	KnownJunction	0	64.39	164.04	71.08	122.97	12.19	96.91	53.21
13	ER2a	ExonRegion	0	1.10	3.12	1.27	6.73	1.31	10.43	0.00
14	E2a_E4a	KnownJunction	1	1.02	5.33	0.00	8.29	0.00	20.10	0.00
15	ER3a	ExonRegion	0	4.05	3.47	3.69	0.88	0.84	0.00	0.97
16	E3_Da	NovelBoundary	0	365.19	185.34	254.90	192.67	349.20	207.30	204.12
17	E3a_E4a	KnownJunction	0	0.00	1.29	0.83	0.00	0.00	0.00	0.63
18	ER4a	ExonRegion	0	83.44	234.00	114.51	145.60	16.63	190.10	66.59
19	E4a_E5a	KnownJunction	0	198.93	300.15	278.09	219.68	37.88	298.12	139.37
20	ER5a	ExonRegion	0	258.01	342.71	264.97	230.44	107.86	325.67	144.47
21	E5a_E6a	KnownJunction	0	294.89	397.12	281.11	287.49	47.65	345.29	158.06
22	ER6a	ExonRegion	0	264.77	408.37	275.93	276.33	67.60	328.97	151.68
23	E6_Da	NovelBoundary	0	204.84	324.08	232.44	210.42	86.13	255.91	111.77
24	E6b_E7a	KnownJunction	0	247.45	336.20	285.81	231.47	101.20	260.84	121.86
25	ER6b	ExonRegion	0	245.35	365.04	289.50	243.22	102.04	282.74	136.40
26	ER7a	ExonRegion	0	269.43	371.48	310.36	232.62	106.24	280.38	154.61
27	E7a_E8a	KnownJunction	0	132.60	147.46	151.81	106.41	43.92	114.70	80.17
28	E7a_E8b	KnownJunction	0	95.97	136.98	127.64	87.15	38.34	95.19	54.30
29	E7a_E9a	NovelJunction	0	4.69	11.95	2.59	13.95	0.97	18.12	0.00
30	ER8a	ExonRegion	0	161.95	210.47	197.97	135.61	51.02	152.94	101.02
31	ER8b	ExonRegion	0	296.90	303.51	362.37	236.79	81.61	282.20	139.52
32	E8a_E9a	KnownJunction	0	284.90	306.01	350.18	310.17	65.84	327.04	129.00
33	ER9a	ExonRegion	0	308.61	269.10	363.12	257.33	81.69	308.34	133.53
34	E9a_E10a	KnownJunction	0	242.15	245.01	265.77	238.32	88.89	273.79	137.64
35	ER10a	ExonRegion	0	217.53	265.75	252.16	212.13	72.62	236.07	124.13
36	E10a_E11a	KnownJunction	0	164.13	208.39	223.79	172.90	58.60	210.67	116.92
37	ER11a	ExonRegion	0	164.63	238.21	210.67	184.34	73.04	195.88	113.62
38	E11a_E12a	KnownJunction	0	174.76	195.35	214.58	145.61	67.59	145.20	120.23
39	E11a_E13a	NovelJunction	0	2.05	5.88	4.07	2.71	0.00	13.86	0.00
40	ER12a	ExonRegion	0	190.95	228.04	254.00	159.14	73.80	185.31	129.32
41	E12a_E13a	KnownJunction	0	150.81	218.89	231.78	149.65	64.11	191.99	120.67
42	ER13a	ExonRegion	0	171.92	204.91	241.74	180.36	86.53	207.83	153.62
43	E13a_E14a	KnownJunction	0	165.00	189.52	215.68	169.51	118.81	179.48	144.10
44	ER14a	ExonRegion	0	256.23	174.68	259.14	151.91	86.40	194.05	147.37
45	E14a_E15a	KnownJunction	0	263.07	148.33	231.88	130.34	55.67	198.32	125.89
46	E15_Aa	NovelBoundary	1	87.71	18.26	62.63	18.86	3.11	9.27	6.00
47	ER15a	ExonRegion	0	510.85	276.31	372.74	238.68	143.31	315.75	162.44
48	E15_Da	NovelBoundary	1	129.63	28.90	60.31	13.06	9.24	18.89	6.65
49	E15a_E16a	KnownJunction	1	733.57	287.99	472.70	321.68	192.72	380.48	142.86
50	ER16a	ExonRegion	0	418.53	294.78	345.76	254.26	151.98	288.04	152.37
51	E16a_E17a	KnownJunction	0	348.49	249.00	280.65	218.60	129.40	271.37	121.54
52	ER17a	ExonRegion	0	358.83	258.20	300.45	210.15	141.71	295.45	144.91
53	E17a_E18a	KnownJunction	0	352.07	283.23	311.12	233.36	127.74	345.07	146.74
54	ER18a	ExonRegion	0	493.50	322.75	394.80	292.92	162.39	375.96	158.36
55	E18a_E19a	KnownJunction	0	422.39	277.79	343.25	264.19	138.71	322.00	151.84
56	ER19a	ExonRegion	0	345.65	266.53	260.01	240.06	136.82	316.20	149.33
57	E19a_E20a	KnownJunction	0	272.21	273.04	255.61	234.91	117.87	346.47	139.32
58	ER20a	ExonRegion	0	248.11	180.20	200.34	177.24	81.99	278.54	99.15
59	ER20b	ExonRegion	0	17.29	5.77	16.93	5.61	7.29	6.13	5.57