Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RPS21	Gene	0	376.40	1644.13	311.44	1199.95	875.11	941.07	937.12
2	370592	Transcript	0	0	0	0	0	0	0	0
3	317311	Transcript	0	0	0	0	0	0	0	0
4	343986	Transcript	0	1260.84	5097.20	1006.44	3948.13	4646.03	2622.44	2964.21
5	370562	Transcript	0	13.64	58.13	13.50	38.79	81.90	38.02	29.83
6	337102	Transcript	0	49.34	170.06	50.19	175.12	0.00	137.52	139.14
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	1.19	0.00	0.08
8	ER1b	ExonRegion	0	9.88	26.65	24.84	29.59	230.12	20.97	93.99
9	E1_Da	NovelBoundary	0	26.44	39.43	49.43	41.58	437.45	32.83	165.67
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1b_E2b	KnownJunction	0	1744.87	6402.98	1376.68	4968.94	6253.75	3277.21	3895.98
12	ER1c	ExonRegion	0	776.82	3791.41	636.21	2927.33	3038.32	1967.67	2032.43
13	ER2a	ExonRegion	0	79.73	356.93	63.05	269.19	277.42	181.64	207.56
14	E2_Ac	KnownBoundary	0	2153.87	9823.31	1659.54	7418.74	6982.71	4995.29	5451.43
15	ER2b	ExonRegion	0	1927.54	8601.93	1498.67	6497.30	6597.72	4373.27	4844.78
16	ER2c	ExonRegion	0	1884.30	8933.17	1406.14	6725.40	3520.84	4642.98	4821.52
17	E2a_E3a	KnownJunction	0	332.55	1834.98	240.24	1385.03	406.19	1183.67	713.53
18	ER3a	ExonRegion	0	273.17	4716.80	274.59	2429.37	236.16	2000.18	828.05
19	E3_Da	KnownBoundary	0	1.52	15.68	3.22	6.18	4.15	3.78	3.91
20	E3a_E3b	KnownJunction	0	299.57	8835.32	378.17	4613.10	99.06	3582.11	1215.59
21	E3a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E3a_E3d	NovelJunction	0	0.85	380.04	0.00	174.55	0.00	138.47	0.89
23	ER3b	ExonRegion	0	5.62	60.01	8.32	35.12	14.57	32.22	30.58
24	E3_Ab	KnownBoundary	0	0.00	7.30	0.66	6.15	3.80	7.83	4.36
25	E3_Ac	KnownBoundary	0	1.80	5.57	3.65	4.06	0.85	2.84	7.11
26	ER3c	ExonRegion	1	279.71	8206.36	359.69	4940.46	127.15	3789.56	1803.19
27	ER3d	ExonRegion	0	1765.04	7416.51	1411.89	5740.96	677.44	4466.59	4843.99
28	E3_Db	KnownBoundary	0	13.32	43.90	31.80	17.96	13.07	37.14	58.72
29	E3b_E3d	KnownJunction	0	3399.06	4052.08	2545.02	3756.05	2208.67	3183.25	5734.92
30	ER3e	ExonRegion	0	6.82	32.44	11.50	18.44	17.77	17.90	35.30
31	E3_Dc	KnownBoundary	0	5.92	26.74	11.24	19.75	7.22	13.29	37.98
32	ER3f	ExonRegion	0	20.05	41.67	15.26	29.16	18.26	22.97	42.01
33	E3_Ad	KnownBoundary	0	0.00	10.75	2.85	3.09	2.95	4.64	4.82
34	ER3g	ExonRegion	0	2362.47	3188.49	1872.25	2902.13	4884.10	2469.60	3956.36
35	E3_Dd	KnownBoundary	0	865.92	1691.80	731.03	1526.04	5124.02	1340.20	1757.73
36	E3d_E3e	KnownJunction	0	98.67	340.11	100.38	350.23	0.00	275.05	278.27
37	E3_De	KnownBoundary	0	10.03	78.18	8.67	62.53	217.66	60.14	19.81
38	E3e_E3f	KnownJunction	0	304.32	1867.82	385.90	1599.05	8370.69	1928.06	1180.87
39	ER3h	ExonRegion	0	1123.15	2259.39	948.20	1965.71	7953.87	1830.17	2201.20
40	ER3i	ExonRegion	0	584.51	2351.10	672.84	1935.46	7643.67	2081.92	1821.74
41	ER3j	ExonRegion	0	18.91	115.06	22.31	80.92	149.80	87.07	40.68
42	E3_Af	KnownBoundary	0	22.83	82.28	34.39	53.04	19.85	68.90	25.80
43	ER3k	ExonRegion	0	254.03	1370.50	329.51	1051.78	3049.87	1315.75	786.68
44	ER3l	ExonRegion	0	145.75	644.95	182.59	411.22	460.00	636.84	315.86
45	ER3m	ExonRegion	0	9.99	15.79	8.13	9.98	144.96	9.81	6.07