Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TMEM189 Gene 0 200.16 306.36 253.85 221.22 457.16 258.21 329.33 2 371656 Transcript 0 3.00 0.83 5.50 1.78 3.71 0.98 3.40 3 371652 Transcript 0 0 0 0 0 0 0 0 4 341698 Transcript 0 0 0 0 0 0 0 0 5 371658 Transcript 0 0 0 0 0 0 0 0 6 371650 Transcript 0 0.77 3.19 0.93 3.74 0.00 0.00 0.00 7 371677 Transcript 0 0.00 0.00 0.00 0.00 7.17 0.00 0.89 8 340309 Transcript 0 2.63 0.00 1.47 0.93 43.73 0.58 2.53 9 396059 Transcript 0 0.58 0.00 0.00 0.00 6.55 0.00 3.40 10 371657 Transcript 1 3.89 73.74 1.94 22.76 0.00 48.05 0.89 11 371674 Transcript 0 0 0 0 0 0 0 0 12 354374 Transcript 0 0.00 0.00 0.09 0.00 0.00 0.00 0.09 13 IG27_AR5 ActiveIntergenicRegion 0 0.29 4.68 0.75 4.80 1.01 27.87 0.00 14 ER1a ExonRegion 0 0.00 0.71 0.00 0.00 0.00 0.00 0.67 15 ER1b ExonRegion 0 2.60 8.41 0.83 4.89 2.30 4.53 5.29 16 ER1c ExonRegion 0 9.23 62.98 7.95 38.09 7.99 33.30 18.76 17 E1a_E2a KnownJunction 0 32.16 148.67 34.33 80.87 25.29 78.76 75.13 18 ER2a ExonRegion 0 75.54 337.23 123.65 184.66 98.15 152.27 163.03 19 E2a_E4a KnownJunction 0 111.82 446.06 226.26 203.21 147.54 182.00 245.54 20 E2a_E5a NovelJunction 1 12.10 62.03 15.10 69.43 3.92 29.10 7.24 21 ER3a ExonRegion 0 0.77 3.19 0.93 3.74 0.00 0.00 0.00 22 ER4a ExonRegion 1 130.99 519.02 223.46 243.89 137.86 184.11 266.74 23 E4_Da NovelBoundary 0 78.84 267.05 102.70 133.15 50.05 108.83 131.49 24 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E4b_E5a KnownJunction 1 161.84 525.40 215.50 281.42 138.71 191.83 308.66 26 ER4b ExonRegion 1 148.65 538.99 216.16 270.59 139.83 206.51 303.42 27 ER5a ExonRegion 1 218.47 698.90 340.45 384.49 342.08 270.05 484.51 28 E5a_E6a KnownJunction 1 234.21 709.20 320.77 372.64 250.45 272.63 510.54 29 ER6a ExonRegion 1 267.62 674.47 357.71 357.86 397.22 244.45 515.21 30 E6a_E7a KnownJunction 1 185.26 561.16 250.02 359.39 154.82 215.98 390.22 31 E6a_E10a KnownJunction 0 0.62 2.23 13.85 4.39 1.06 2.95 0.00 32 ER7a ExonRegion 0 128.27 252.25 165.57 162.59 129.68 105.14 176.41 33 E7_Da KnownBoundary 0 50.70 24.06 66.09 30.15 52.93 17.26 42.97 34 ER7b ExonRegion 0 37.64 33.65 58.30 28.79 38.66 19.74 46.28 35 E7_Db KnownBoundary 0 20.04 6.09 40.35 15.69 22.29 6.03 26.10 36 ER7c ExonRegion 0 8.99 1.77 16.50 5.33 11.14 2.93 9.53 37 ER8a ExonRegion 0 2.24 0.36 2.82 1.56 32.44 0.54 2.02 38 E8_Da KnownBoundary 0 2.20 0.00 0.78 1.35 68.44 1.66 2.19 39 E8a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 7.17 0.00 0.89 40 E8a_E10a NovelJunction 0 0.00 0.00 0.00 0.00 17.15 0.00 0.86 41 ER8b ExonRegion 0 2.63 0.00 1.47 0.93 43.73 0.58 2.53 42 E8_Ab KnownBoundary 0 2.14 0.00 1.68 0.00 28.31 0.00 2.49 43 ER8c ExonRegion 0 4.35 0.06 1.98 1.04 39.42 1.51 5.37 44 E8_Ac KnownBoundary 0 5.71 0.00 3.75 0.00 58.23 2.55 4.84 45 ER8d ExonRegion 0 4.83 1.82 2.83 2.23 62.91 1.77 6.87 46 E8b_E10a KnownJunction 0 2.24 2.92 2.47 3.14 53.53 1.21 5.26 47 E8b_E14a KnownJunction 0 0.58 0.00 0.00 0.00 6.55 0.00 3.40 48 ER9a ExonRegion 0 177.42 145.47 173.24 150.83 228.74 195.46 152.55 49 E9a_E10a KnownJunction 0 562.92 505.80 522.86 499.21 262.69 628.99 620.82 50 E9a_E14a NovelJunction 0 28.32 31.24 50.25 32.51 56.96 26.29 74.38 51 ER10a ExonRegion 0 250.09 434.95 291.39 346.30 304.05 480.98 368.26 52 E10_Da NovelBoundary 1 81.00 64.65 89.89 63.53 14.94 47.62 26.43 53 E10a_E14a KnownJunction 0 465.88 456.49 573.84 460.44 505.99 744.77 711.86 54 E10a_E15a KnownJunction 1 3.89 73.74 1.94 22.76 0.00 48.05 0.89 55 I10_AR1 ActiveIntronRegion 0 53.68 37.40 58.27 25.55 20.67 18.07 20.43 56 I10_AR2 ActiveIntronRegion 0 40.35 21.38 39.52 15.67 17.52 11.60 18.46 57 I10_SR2 SilentIntronRegion 0 52.66 13.30 38.06 8.82 21.92 11.37 17.80 58 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 I11 Intron 0 41.19 14.91 38.35 16.13 17.42 15.12 15.54 60 I11_AR1 ActiveIntronRegion 0 41.50 15.02 38.66 16.23 17.56 15.25 15.67 61 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER13a ExonRegion 0 0.00 0.00 0.27 0.00 0.00 0.00 0.27 63 ER14a ExonRegion 0 514.46 524.45 761.26 498.52 1235.85 777.49 973.33 64 E14a_E15a KnownJunction 0 340.27 585.59 627.14 458.90 635.96 818.87 816.23 65 ER15a ExonRegion 0 395.22 652.09 634.80 445.17 791.60 740.78 798.20 66 E15_Da KnownBoundary 0 684.84 684.95 892.61 478.56 1452.08 872.28 945.23 67 ER15b ExonRegion 0 334.37 394.67 391.54 323.63 961.38 440.82 535.55 68 ER15c ExonRegion 0 4.23 0.00 5.42 1.25 6.88 0.00 2.70