Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	COL9A3	Gene	0	3.85	1.00	0.79	1.78	43.91	2.13	0.14
2	343916	Transcript	0	2.91	0.98	0.53	1.52	35.67	1.13	0.09
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.94	0.00	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	0.23	0.00	0.00	0.00	0.35	0.00	0.00
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	2.12	0.00	0.00
7	ER3a	ExonRegion	0	1.02	0.00	0.00	0.00	3.67	0.00	0.00
8	E3a_E4a	KnownJunction	0	2.29	0.00	0.00	0.00	4.13	0.00	0.00
9	ER4a	ExonRegion	0	1.49	0.00	0.00	0.00	11.86	1.69	0.00
10	E4a_E5a	KnownJunction	0	0.82	0.00	0.00	0.00	19.39	3.06	0.00
11	ER5a	ExonRegion	0	1.54	0.00	0.26	1.69	16.83	1.20	0.00
12	E5a_E6a	KnownJunction	0	0.97	0.00	0.75	1.44	13.26	0.00	0.00
13	ER6a	ExonRegion	0	2.54	0.00	0.68	4.23	10.71	0.00	0.00
14	E6a_E7a	KnownJunction	0	1.75	0.00	0.00	4.74	8.46	0.00	0.00
15	E7a_E8a	KnownJunction	0	2.64	0.00	0.00	0.00	18.26	0.00	0.00
16	ER7a	ExonRegion	0	3.46	0.00	0.54	3.69	15.93	0.00	0.00
17	ER8a	ExonRegion	0	2.90	1.17	0.00	0.81	21.21	0.20	0.00
18	E8a_E9a	KnownJunction	0	1.94	1.42	0.00	0.00	17.82	0.00	0.00
19	ER9a	ExonRegion	0	3.80	0.56	0.40	3.16	18.15	1.23	0.00
20	E9a_E10a	KnownJunction	0	4.56	0.00	0.89	4.66	22.20	2.76	0.00
21	ER10a	ExonRegion	0	5.47	1.21	0.68	2.70	31.28	1.43	0.00
22	E10a_E11a	KnownJunction	0	2.69	1.63	0.00	0.00	33.96	1.66	0.00
23	ER11a	ExonRegion	0	2.79	1.39	0.02	0.00	27.62	1.10	0.00
24	E11a_E12a	KnownJunction	0	1.92	1.63	0.00	0.00	35.73	1.05	0.00
25	ER12a	ExonRegion	0	1.79	1.60	0.00	0.00	37.73	2.45	0.00
26	E12a_E13a	KnownJunction	0	1.64	1.55	0.00	0.00	26.90	1.34	0.00
27	ER13a	ExonRegion	0	2.76	1.01	0.28	0.74	19.51	2.54	0.00
28	E13a_E14a	KnownJunction	0	2.87	0.00	0.70	1.68	21.00	3.81	0.00
29	ER14a	ExonRegion	0	4.08	0.00	0.68	1.02	30.43	2.97	0.00
30	E14a_E15a	KnownJunction	0	3.54	0.00	0.00	0.00	22.20	0.00	0.00
31	ER15a	ExonRegion	0	2.90	0.00	1.12	0.74	31.70	0.34	0.00
32	E15a_E16a	KnownJunction	0	0.73	0.00	2.27	1.68	43.85	0.00	0.00
33	ER16a	ExonRegion	0	2.03	0.00	1.64	2.17	50.12	1.09	0.00
34	E16a_E17a	KnownJunction	0	2.57	0.00	0.69	1.60	42.65	1.58	0.00
35	ER17a	ExonRegion	0	3.87	0.00	0.10	3.14	38.08	0.64	0.00
36	E17a_E18a	KnownJunction	0	3.64	0.00	0.00	2.82	39.17	0.00	0.00
37	ER18a	ExonRegion	0	2.65	0.00	0.89	0.97	43.66	0.00	0.00
38	E18a_E19a	KnownJunction	0	1.67	0.00	0.78	1.08	32.83	0.00	0.00
39	ER19a	ExonRegion	0	1.05	0.00	1.64	1.48	28.70	0.00	0.00
40	E19a_E20a	KnownJunction	0	1.03	0.00	0.66	1.68	30.59	0.00	0.00
41	ER20a	ExonRegion	0	1.67	0.00	0.68	3.41	41.63	0.00	0.00
42	E20a_E21a	KnownJunction	0	1.79	0.00	0.70	2.60	50.62	0.00	0.00
43	ER21a	ExonRegion	0	2.90	0.00	1.86	0.79	47.14	0.34	0.00
44	E21a_E22a	KnownJunction	0	3.50	1.16	0.86	0.00	59.64	3.89	0.00
45	ER22a	ExonRegion	0	3.12	0.00	0.88	0.05	43.12	1.23	0.12
46	E22a_E23a	KnownJunction	0	0.75	1.26	0.83	1.25	29.53	0.00	0.59
47	ER23a	ExonRegion	0	1.75	0.07	0.72	1.25	27.21	0.16	0.67
48	E23a_E24a	KnownJunction	0	2.55	1.08	0.63	1.38	38.36	1.66	0.00
49	ER24a	ExonRegion	0	3.19	1.72	1.19	0.40	39.03	1.26	0.11
50	E24a_E25a	KnownJunction	0	2.05	1.52	0.79	0.00	33.20	2.52	0.00
51	I24	Intron	0	0.32	0.00	0.15	0.14	20.26	0.00	0.00
52	I24_AR1	ActiveIntronRegion	0	0.44	0.00	0.20	0.19	24.97	0.00	0.00
53	ER25a	ExonRegion	0	3.33	2.46	1.13	2.11	61.30	1.77	0.45
54	E25a_E26a	KnownJunction	0	3.81	1.63	0.79	3.14	90.57	1.53	0.79
55	ER26a	ExonRegion	0	2.46	4.16	0.92	3.52	72.96	0.71	0.67
56	E26a_E27a	KnownJunction	0	0.92	4.73	0.00	1.63	59.08	0.00	0.00
57	ER27a	ExonRegion	0	3.03	5.30	0.29	1.93	47.71	0.00	0.14
58	E27a_E28a	KnownJunction	0	2.95	3.76	0.59	1.33	30.20	0.00	0.00
59	ER28a	ExonRegion	0	4.08	4.31	0.92	2.13	53.00	1.98	0.00
60	E28a_E29a	KnownJunction	0	3.39	4.10	0.89	1.68	55.23	1.10	0.00
61	ER29a	ExonRegion	0	6.41	2.41	0.49	1.25	82.09	3.23	0.00
62	E29a_E30a	KnownJunction	0	5.56	2.94	0.00	2.60	68.77	3.16	0.00
63	ER30a	ExonRegion	0	7.47	0.70	0.28	2.34	49.83	1.58	0.28
64	E30a_E31a	KnownJunction	0	6.18	0.00	0.00	3.17	57.61	1.13	0.00
65	ER31a	ExonRegion	0	7.67	1.12	0.25	3.04	84.08	2.77	0.35
66	E31a_E32a	KnownJunction	0	13.79	3.10	0.86	4.14	87.23	4.23	0.89
67	ER32a	ExonRegion	0	5.33	0.90	1.43	2.55	64.99	5.04	0.29