Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ELMO2	Gene	0	95.80	132.17	113.00	85.00	110.74	93.04	99.19
2	396391	Transcript	1	34.31	19.81	26.14	20.40	35.39	15.70	9.62
3	290246	Transcript	0	0	0	0	0	0	0	0
4	372176	Transcript	0	7.88	8.00	1.98	2.47	3.52	3.46	6.59
5	352077	Transcript	0	1.44	0.00	2.31	2.90	2.17	0.00	5.57
6	ER1a	ExonRegion	1	27.32	16.29	18.43	14.69	36.77	15.97	13.47
7	E1a_E2a	KnownJunction	0	54.39	42.51	36.70	26.52	55.14	38.75	33.69
8	E1a_E3a	NovelJunction	1	25.17	22.67	26.70	19.70	31.77	25.59	5.40
9	E1a_E3b	KnownJunction	1	34.31	19.81	26.14	20.40	35.39	15.70	9.62
10	ER1b	ExonRegion	1	74.40	47.60	51.30	44.89	80.47	44.80	37.10
11	ER2a	ExonRegion	0	30.92	28.12	24.01	23.29	33.55	26.68	19.86
12	E2a_E3a	KnownJunction	0	11.28	23.80	10.07	17.07	0.88	19.70	7.17
13	E2a_E3b	NovelJunction	0	10.03	12.66	6.38	4.20	7.95	6.38	12.65
14	ER3a	ExonRegion	0	13.50	25.92	9.91	18.08	6.91	24.36	13.56
15	E3_Ac	KnownBoundary	0	42.59	57.48	39.99	43.91	27.39	39.85	33.39
16	ER3b	ExonRegion	0	53.31	64.79	40.93	49.40	38.99	46.30	34.24
17	ER3c	ExonRegion	0	87.30	93.39	69.37	66.06	35.81	74.74	51.30
18	E3a_E4a	KnownJunction	0	88.57	74.35	79.47	69.14	39.90	73.65	50.52
19	ER4a	ExonRegion	0	117.23	70.43	75.87	50.94	72.67	54.30	63.12
20	E4_Da	KnownBoundary	1	28.51	12.56	1.78	6.88	3.02	2.36	8.79
21	E4a_E5a	KnownJunction	0	90.39	50.78	66.26	36.84	120.80	45.05	59.89
22	E4a_E6a	NovelJunction	1	9.71	40.27	17.68	10.78	6.11	22.11	7.75
23	ER4b	ExonRegion	0	12.69	9.33	1.99	3.56	4.76	3.59	5.99
24	E4b_E5a	KnownJunction	0	3.07	6.67	1.97	1.38	2.28	3.32	7.19
25	ER5a	ExonRegion	0	69.29	77.22	67.12	50.44	113.76	52.16	64.81
26	E5a_E6a	KnownJunction	0	51.37	67.89	61.29	41.96	78.29	37.95	56.48
27	ER6a	ExonRegion	0	53.52	77.66	72.57	59.61	71.11	43.82	63.98
28	E6a_E7a	KnownJunction	0	52.34	95.89	70.66	67.57	55.95	50.17	66.05
29	ER7a	ExonRegion	0	70.10	137.43	92.60	67.91	88.59	60.73	95.49
30	E7a_E8a	KnownJunction	0	48.45	108.05	75.11	49.22	100.53	38.65	105.32
31	E7a_E8b	KnownJunction	0	1.44	0.00	2.31	2.90	2.17	0.00	5.57
32	E7a_E9a	NovelJunction	1	22.06	59.24	23.25	40.45	15.58	38.94	5.25
33	ER8a	ExonRegion	0	49.84	107.60	77.51	54.87	100.54	43.09	111.21
34	ER8b	ExonRegion	0	83.39	114.07	98.09	65.41	113.92	54.21	101.36
35	E8a_E9a	KnownJunction	0	101.73	105.24	106.94	69.79	114.48	45.45	101.17
36	ER9a	ExonRegion	0	106.40	150.95	111.80	94.48	121.20	75.19	107.14
37	E9a_E10a	KnownJunction	0	125.89	168.11	139.91	88.80	130.18	87.31	100.18
38	ER10a	ExonRegion	0	99.96	164.39	127.79	88.66	100.22	86.21	106.45
39	E10a_E11a	KnownJunction	0	74.00	167.32	121.76	84.06	77.57	87.15	94.01
40	E11_Aa	NovelBoundary	1	33.13	3.15	58.30	4.12	6.41	0.00	0.86
41	ER11a	ExonRegion	0	80.31	158.34	124.65	84.16	93.86	97.33	113.99
42	E11_Da	NovelBoundary	1	27.25	5.52	16.01	0.00	6.52	3.11	3.91
43	E11a_E12a	KnownJunction	0	72.60	115.17	95.99	64.02	88.25	76.73	105.38
44	I11_AR1	ActiveIntronRegion	0	20.27	6.43	12.42	1.80	3.84	1.87	7.67
45	ER12a	ExonRegion	0	97.35	162.59	144.42	90.91	126.73	108.48	124.62
46	E12a_E13a	KnownJunction	0	93.68	159.99	125.73	114.49	118.17	105.89	119.74
47	ER13a	ExonRegion	0	132.28	185.34	169.94	114.92	185.08	128.24	161.95
48	E13a_E14a	KnownJunction	0	146.45	187.71	209.62	107.47	258.77	107.52	161.89
49	ER14a	ExonRegion	0	112.25	174.59	153.62	107.99	149.61	111.85	139.02
50	E14a_E15a	KnownJunction	0	73.12	133.85	93.72	83.25	122.09	87.05	93.84
51	ER15a	ExonRegion	0	97.33	137.75	142.35	89.61	152.42	77.34	120.33
52	E15a_E16a	KnownJunction	0	147.89	162.46	216.86	92.41	304.00	104.33	166.40
53	ER16a	ExonRegion	0	113.09	172.59	140.11	104.65	153.12	87.19	120.46
54	E16a_E17a	KnownJunction	0	104.13	191.23	160.46	110.69	123.24	102.13	131.96
55	ER17a	ExonRegion	0	122.66	163.53	138.48	108.85	130.79	113.33	119.97
56	E17a_E18a	KnownJunction	0	85.15	102.41	106.47	88.29	103.53	109.37	116.96
57	ER18a	ExonRegion	0	85.12	121.54	105.82	68.95	104.87	97.65	82.68
58	E18a_E19a	KnownJunction	0	99.77	118.83	89.76	72.69	150.44	104.39	100.00
59	ER19a	ExonRegion	0	154.28	158.89	166.87	81.55	162.30	106.68	113.44
60	E19a_E20a	KnownJunction	0	160.51	175.39	196.95	112.10	157.98	131.24	102.21
61	ER20a	ExonRegion	0	180.37	208.25	205.04	120.52	166.59	129.13	134.83
62	E20a_E21a	KnownJunction	0	222.29	237.89	237.38	136.48	186.64	141.15	156.44
63	ER21a	ExonRegion	0	191.57	202.10	210.65	140.32	201.17	149.74	150.73
64	E21a_E22a	KnownJunction	0	124.82	162.49	145.05	129.47	165.29	130.65	101.94
65	ER22a	ExonRegion	0	85.03	141.51	111.38	88.84	112.11	88.44	101.67
66	E22_Da	KnownBoundary	1	43.84	118.22	80.43	76.37	75.98	64.13	87.99
67	ER22b	ExonRegion	0	93.73	128.62	108.60	91.89	103.40	111.60	98.81
68	ER22c	ExonRegion	0	4.92	3.16	3.12	1.00	6.15	2.45	2.43