Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C20orf112	Gene	0	15.10	32.53	3.22	6.31	21.59	6.56	21.38
2	375672	Transcript	0	0.40	0.19	0.09	0.17	0.26	1.28	1.63
3	201961	Transcript	0	1.33	1.52	0.35	0.63	5.14	0.14	5.22
4	375673	Transcript	0	0.66	0.00	0.00	0.00	0.00	0.00	0.00
5	375675	Transcript	0	0.00	0.00	0.00	0.00	1.21	0.00	0.00
6	375678	Transcript	0	0.45	0.03	0.32	0.00	2.41	1.17	0.56
7	375677	Transcript	0	0	0	0	0	0	0	0
8	326071	Transcript	0	0.92	5.93	0.00	1.51	2.70	1.94	0.26
9	397984	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	359676	Transcript	0	30.29	38.88	5.17	10.52	38.70	13.31	32.45
11	ER1a	ExonRegion	0	0.00	0.07	0.00	0.00	0.00	0.00	0.62
12	E1_Ab	KnownBoundary	0	0.00	1.18	0.00	0.00	0.00	0.00	4.16
13	ER1b	ExonRegion	1	0.60	2.54	0.00	0.33	1.27	1.27	9.60
14	E1a_E2a	KnownJunction	0	0.98	0.00	0.00	0.00	0.00	2.73	0.89
15	E1a_E6a	KnownJunction	1	0.00	2.76	0.00	1.06	2.28	0.00	13.29
16	ER2a	ExonRegion	0	0.21	0.49	0.27	0.50	0.77	1.11	3.39
17	ER3a	ExonRegion	0	0.06	0.00	0.00	0.00	0.08	0.00	0.16
18	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER4a	ExonRegion	0	0.50	0.00	0.00	0.00	0.00	0.00	0.93
20	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER5a	ExonRegion	0	0.01	0.00	0.00	0.00	0.00	0.00	0.01
22	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER6a	ExonRegion	1	2.07	5.19	0.38	0.67	6.17	1.49	33.70
24	E6a_E7a	KnownJunction	1	3.27	9.59	1.68	0.00	5.30	2.73	49.17
25	ER7a	ExonRegion	1	2.95	9.65	0.83	0.00	8.26	1.63	51.91
26	E7a_E8a	KnownJunction	1	3.24	10.82	0.00	0.00	0.90	1.66	47.05
27	ER8a	ExonRegion	1	3.46	8.99	1.03	0.00	5.13	3.33	48.10
28	E8_Ab	KnownBoundary	1	4.09	8.04	2.30	0.00	3.97	4.56	44.48
29	ER8b	ExonRegion	1	2.91	7.47	1.74	0.00	7.07	3.64	49.53
30	E8a_E9a	KnownJunction	0	1.02	0.00	0.00	0.00	0.00	0.00	0.00
31	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.57
32	E8a_E13a	KnownJunction	1	1.54	6.25	0.00	0.00	12.10	2.84	52.30
33	ER9a	ExonRegion	0	0.31	0.00	0.00	0.00	0.00	0.00	0.00
34	ER10a	ExonRegion	0	0.57	1.34	0.94	0.00	2.73	0.00	3.01
35	E10a_E11a	KnownJunction	0	0.00	1.63	0.00	0.00	0.00	0.00	0.89
36	ER10b	ExonRegion	0	0.00	0.00	0.00	0.00	1.21	0.00	0.00
37	E11_Aa	NovelBoundary	1	10.48	0.00	2.40	1.68	22.89	0.00	1.73
38	ER11a	ExonRegion	0	4.00	0.18	1.05	0.83	13.14	0.41	1.49
39	E11_Da	NovelBoundary	0	3.12	1.31	3.94	1.27	8.99	0.00	3.21
40	ER12a	ExonRegion	0	0.92	5.93	0.00	1.51	2.70	1.94	0.26
41	E12a_E13a	KnownJunction	0	6.73	32.84	0.55	4.69	3.23	2.84	0.00
42	ER12b	ExonRegion	0	5.61	23.08	0.09	5.37	3.77	4.32	0.23
43	ER13a	ExonRegion	0	15.21	68.06	4.43	8.74	31.05	10.00	42.37
44	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	1.04	1.05	0.00
45	E13a_E14b	KnownJunction	0	2.07	1.31	0.66	0.00	8.69	1.29	2.31
46	E13a_E15a	KnownJunction	0	17.26	80.15	5.03	21.65	57.12	9.54	41.40
47	ER14a	ExonRegion	0	0.90	0.07	0.64	0.00	3.78	1.29	1.12
48	ER14b	ExonRegion	0	9.11	4.46	2.29	2.25	11.94	1.78	3.58
49	ER14c	ExonRegion	0	1.54	0.00	0.00	0.00	1.62	0.00	1.35
50	ER15a	ExonRegion	0	28.22	107.96	6.46	20.30	33.44	18.80	35.21
51	E15_Da	NovelBoundary	0	11.22	6.23	1.54	3.09	0.97	2.87	3.17
52	E15a_E16a	KnownJunction	1	41.17	98.18	7.92	7.69	41.93	12.46	25.41
53	I15_AR2	ActiveIntronRegion	0	2.11	4.17	2.00	1.30	9.68	1.72	2.27
54	E16_Aa	NovelBoundary	0	12.95	4.78	3.13	4.47	6.52	1.02	3.91
55	ER16a	ExonRegion	0	45.64	124.57	8.85	18.10	62.20	17.32	55.53
56	E16a_E17a	KnownJunction	0	69.60	161.81	22.17	20.78	56.96	18.92	89.89
57	ER17a	ExonRegion	0	65.40	154.08	15.15	26.03	82.52	19.44	79.46
58	E17a_E18a	KnownJunction	0	90.98	171.50	18.38	27.80	144.50	24.23	103.56
59	ER18a	ExonRegion	0	49.81	134.24	14.49	27.51	98.08	22.70	72.93
60	E18a_E19a	KnownJunction	0	70.60	141.18	19.20	24.06	140.65	23.82	97.97
61	ER19a	ExonRegion	0	47.83	116.91	11.19	19.64	67.23	19.32	60.69
62	E19a_E20a	KnownJunction	0	54.73	97.18	8.32	11.11	67.04	24.87	72.96
63	ER20a	ExonRegion	0	41.84	77.81	8.13	14.40	100.33	16.78	52.92
64	E20_Da	KnownBoundary	0	11.68	44.35	3.64	14.49	17.75	5.84	13.64
65	E20a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER20b	ExonRegion	0	28.28	42.10	3.65	7.27	30.54	12.86	20.35
67	E20_Ab	KnownBoundary	0	38.67	23.93	1.48	10.32	28.77	10.59	21.63
68	ER20c	ExonRegion	1	46.96	31.14	4.46	10.27	35.84	14.77	29.83
69	E20_Db	KnownBoundary	0	51.09	35.68	7.56	13.09	40.18	14.31	30.35
70	ER20d	ExonRegion	0	32.31	35.65	6.70	13.78	46.85	13.75	44.54
71	IG15	Intergenic	0	33.84	16.67	8.52	7.48	39.95	8.29	24.72
72	IG15_AR2	ActiveIntergenicRegion	0	60.51	29.35	14.38	12.33	72.25	14.12	44.44