Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PTPRT	Gene	0	0.07	0.10	52.96	173.45	2.24	1.27	0.00
2	373201	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	373198	Transcript	0	0	0	0	0	0	0	0
4	373193	Transcript	0	0	0	0	0	0	0	0
5	373190	Transcript	0	0.00	0.00	21.68	114.78	1.04	1.50	0.00
6	356100	Transcript	0	0	0	0	0	0	0	0
7	373184	Transcript	0	0.00	0.00	20.00	80.95	0.50	0.00	0.00
8	373187	Transcript	0	0	0	0	0	0	0	0
9	IG6_AR7	ActiveIntergenicRegion	0	0.00	0.00	1.74	17.68	0.40	0.00	0.00
10	IG6_SR3	SilentIntergenicRegion	0	0.00	0.00	3.59	17.23	0.54	0.61	0.00
11	IG6_AR3	ActiveIntergenicRegion	0	0.00	0.00	2.71	9.98	0.81	0.00	0.00
12	IG6_AR2	ActiveIntergenicRegion	0	0.00	0.00	4.73	18.94	0.65	0.15	0.00
13	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1c	ExonRegion	0	0.00	0.00	0.00	1.91	0.00	0.00	0.00
17	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	2.90	0.00	0.00	0.00
18	ER1d	ExonRegion	0	0.00	0.00	0.00	13.63	0.00	0.00	0.00
19	E1_Ae	KnownBoundary	0	0.00	0.00	0.79	47.27	0.00	0.00	0.00
20	ER1e	ExonRegion	0	0.00	0.00	4.86	69.67	0.00	0.20	0.00
21	E1a_E2a	KnownJunction	0	0.00	0.00	9.77	118.93	0.00	1.21	0.00
22	I1_AR1	ActiveIntronRegion	0	0.00	0.00	4.61	39.80	0.58	0.49	0.00
23	ER2a	ExonRegion	0	0.00	0.73	26.90	173.41	0.63	1.10	0.00
24	E2a_E3a	KnownJunction	0	0.00	0.00	33.84	166.34	0.00	1.50	0.00
25	ER3a	ExonRegion	0	0.43	0.34	53.05	238.51	1.23	2.33	0.00
26	E3a_E4a	KnownJunction	0	0.00	0.00	83.99	330.38	0.00	4.15	0.00
27	ER4a	ExonRegion	0	0.00	0.15	73.26	323.31	0.82	2.99	0.00
28	E4a_E5a	KnownJunction	0	0.00	1.08	80.17	375.56	1.15	3.16	0.00
29	ER5a	ExonRegion	0	0.00	0.69	76.80	346.02	2.41	3.51	0.00
30	E5a_E6a	KnownJunction	0	0.00	0.00	51.24	286.54	2.88	1.66	0.00
31	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	8.72	0.00	0.00	0.00
32	ER6a	ExonRegion	0	0.00	0.53	63.31	309.90	2.31	3.64	0.00
33	E6a_E7a	KnownJunction	0	0.00	0.00	61.49	255.66	2.03	1.47	0.00
34	ER7a	ExonRegion	0	0.00	0.00	57.18	290.11	2.46	1.80	0.00
35	E7a_E8a	KnownJunction	0	0.00	0.00	63.23	292.07	4.24	0.00	0.00
36	ER8a	ExonRegion	0	0.13	0.62	57.96	282.66	2.51	0.00	0.00
37	E8a_E9a	KnownJunction	0	0.00	0.00	54.00	204.46	0.00	0.00	0.00
38	ER9a	ExonRegion	0	0.89	0.00	61.33	221.97	1.03	0.00	0.00
39	E9a_E10a	KnownJunction	0	0.00	0.00	53.47	199.04	2.17	0.00	0.00
40	ER10a	ExonRegion	0	0.00	0.00	68.70	255.49	1.56	0.39	0.00
41	E10a_E11a	KnownJunction	0	0.00	0.00	94.14	310.11	2.03	1.15	0.00
42	ER11a	ExonRegion	0	0.00	0.00	87.03	276.69	3.38	0.14	0.00
43	E11a_E12a	KnownJunction	0	0.00	0.00	92.47	272.56	2.88	0.00	0.00
44	ER12a	ExonRegion	0	0.00	1.35	111.60	329.24	2.52	1.28	0.00
45	E12a_E13a	KnownJunction	0	0.00	0.00	84.89	249.13	2.77	1.66	0.00
46	ER13a	ExonRegion	0	0.00	0.00	102.01	305.88	2.12	2.32	0.00
47	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	E13a_E15a	KnownJunction	0	0.00	0.00	76.22	252.14	4.31	1.47	0.00
49	ER14a	ExonRegion	0	0.00	0.00	0.68	0.00	0.00	0.00	0.00
50	E14a_E15a	KnownJunction	0	0.00	0.00	0.70	0.00	0.00	0.00	0.00
51	ER15a	ExonRegion	0	0.00	0.00	74.85	288.04	2.47	0.22	0.00
52	E15a_E16a	KnownJunction	0	0.00	0.00	17.73	74.09	0.95	0.00	0.00
53	E15a_E17b	KnownJunction	0	0.00	0.00	27.53	144.53	2.35	0.00	0.00
54	E16a_E17a	KnownJunction	0	0.00	0.00	5.96	11.89	0.00	0.00	0.00
55	E16a_E17b	KnownJunction	0	0.00	0.00	11.48	45.27	0.00	1.13	0.00
56	ER16a	ExonRegion	0	0.00	0.00	24.32	82.67	0.27	0.00	0.00
57	ER17a	ExonRegion	0	0.00	0.00	12.87	33.04	0.16	0.00	0.00
58	ER17b	ExonRegion	0	0.00	0.00	40.48	205.69	2.28	0.00	0.00
59	E17a_E18a	KnownJunction	0	0.00	0.00	15.30	61.98	0.00	0.00	0.00
60	E17a_E18b	KnownJunction	0	0.00	0.00	21.68	114.78	1.04	1.50	0.00
61	ER18a	ExonRegion	0	0.00	0.00	18.29	86.04	0.40	0.00	0.00
62	ER18b	ExonRegion	0	0.00	0.00	41.28	177.31	2.54	1.00	0.00
63	E18a_E19a	KnownJunction	0	0.00	0.00	44.26	241.76	6.36	0.00	0.00
64	ER19a	ExonRegion	0	0.00	0.00	63.67	253.30	2.89	1.43	0.00
65	E19a_E20a	KnownJunction	0	0.00	0.00	53.95	257.56	4.13	4.93	0.00
66	ER20a	ExonRegion	0	0.00	0.00	64.15	280.03	2.88	1.96	0.00
67	E20a_E21a	KnownJunction	0	0.00	0.00	57.09	243.77	2.14	0.00	0.00
68	ER21a	ExonRegion	0	0.00	0.00	74.81	274.33	1.03	2.12	0.00
69	E21a_E22a	KnownJunction	0	0.00	0.00	59.54	208.79	0.92	3.30	0.00
70	ER22a	ExonRegion	0	0.00	0.00	60.08	262.84	3.31	1.10	0.00
71	E22a_E23a	KnownJunction	0	0.00	0.00	17.70	101.02	0.97	0.00	0.00
72	E22a_E24a	KnownJunction	0	0.00	0.00	35.19	203.16	2.10	0.00	0.00
73	ER23a	ExonRegion	0	0.00	0.00	19.94	80.26	0.54	0.00	0.00
74	E23a_E24a	KnownJunction	0	0.00	0.00	22.36	61.55	0.00	0.00	0.00
75	ER24a	ExonRegion	0	0.23	0.00	58.24	240.15	0.86	1.93	0.00
76	E24a_E25a	KnownJunction	0	0.78	0.00	42.84	147.40	1.18	1.66	0.00
77	ER25a	ExonRegion	0	0.08	0.00	37.97	178.61	1.05	0.95	0.00
78	E25a_E26a	KnownJunction	0	0.00	0.00	44.68	174.06	1.75	0.00	0.00
79	ER26a	ExonRegion	0	0.29	0.00	56.15	295.71	2.79	0.24	0.00
80	E26a_E27a	KnownJunction	0	0.00	0.00	50.53	307.38	2.24	1.55	0.00
81	ER27a	ExonRegion	0	0.00	0.00	63.04	308.57	1.86	2.20	0.00
82	E27a_E28a	KnownJunction	0	0.00	0.00	77.05	302.72	0.85	2.89	0.00
83	ER28a	ExonRegion	0	0.00	0.00	58.00	276.49	0.79	1.99	0.00
84	E28a_E29a	KnownJunction	0	0.00	0.00	73.76	307.13	0.00	1.53	0.00
85	ER29a	ExonRegion	0	0.00	0.00	61.60	256.20	1.71	0.24	0.00
86	E29a_E30a	KnownJunction	0	0.00	0.00	60.17	173.27	4.45	0.00	0.00
87	ER30a	ExonRegion	0	0.00	0.00	59.99	225.36	2.42	2.22	0.00
88	E30a_E31a	KnownJunction	0	0.00	0.00	52.38	162.33	0.00	0.00	0.00
89	E30a_E32a	NovelJunction	0	0.00	0.00	2.87	11.92	0.00	0.00	0.00
90	ER31a	ExonRegion	0	0.00	0.00	42.60	184.89	2.18	2.98	0.00
91	E31a_E32a	KnownJunction	0	0.00	0.00	57.21	248.51	5.44	3.16	0.00
92	ER32a	ExonRegion	0	0.54	0.00	70.15	275.15	2.67	3.16	0.00
93	E32a_E33a	KnownJunction	0	0.83	0.00	37.59	194.49	2.14	3.43	0.00
94	ER33a	ExonRegion	0	0.06	0.05	51.24	137.09	2.47	1.24	0.00
95	IG5_AR3	ActiveIntergenicRegion	0	0.00	0.00	5.44	10.53	0.00	0.00	0.00
96	IG5_SR3	SilentIntergenicRegion	0	0.00	0.00	4.72	9.87	0.00	0.00	0.00