Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZHX3	Gene	0	16.41	8.04	14.86	11.70	10.71	14.74	47.10
2	396939	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	373262	Transcript	0	1.43	0.00	2.23	0.53	0.77	1.38	3.21
4	373263	Transcript	0	0	0	0	0	0	0	0
5	373261	Transcript	0	6.44	3.21	7.53	1.38	0.00	11.34	14.09
6	396932	Transcript	0	0.01	0.00	0.00	0.00	0.01	0.00	0.22
7	309060	Transcript	0	0.00	0.00	0.68	0.00	0.00	0.00	0.67
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1b	ExonRegion	0	0.03	0.02	0.48	0.00	0.00	0.07	0.08
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	9.03	5.10	5.70	4.99	4.10	11.48	19.48
12	E2a_E4a	KnownJunction	0	11.65	9.96	4.73	3.93	1.04	6.78	21.43
13	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E2b_E4a	KnownJunction	1	6.44	3.21	7.53	1.38	0.00	11.34	14.09
15	ER2b	ExonRegion	1	6.99	4.20	7.20	1.59	1.55	12.04	13.68
16	ER3a	ExonRegion	0	0.02	0.00	0.00	0.00	0.02	0.00	0.00
17	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.67
18	ER4a	ExonRegion	0	16.11	22.84	16.14	14.25	6.44	30.80	57.76
19	E4_Ab	KnownBoundary	1	17.32	25.33	14.59	9.54	10.07	27.76	65.80
20	ER4b	ExonRegion	0	16.04	11.66	20.38	19.26	8.93	28.91	65.16
21	E4_Da	KnownBoundary	0	24.73	12.45	22.12	12.98	8.18	29.69	68.65
22	ER4c	ExonRegion	0	17.96	13.20	16.20	19.37	8.63	23.40	77.92
23	E4_Db	KnownBoundary	1	18.76	9.43	15.23	12.22	5.58	11.85	79.94
24	ER4d	ExonRegion	0	13.65	11.08	15.36	11.12	7.45	20.74	67.34
25	E4c_E6a	KnownJunction	0	2.20	0.00	3.41	1.06	1.18	1.58	4.73
26	E4c_E7a	KnownJunction	1	9.16	1.58	11.17	3.98	5.42	22.97	46.96
27	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER6a	ExonRegion	0	0.66	0.00	1.06	0.00	0.37	1.18	1.70
29	E6_Da	NovelBoundary	0	5.54	2.86	4.91	3.12	0.95	8.84	14.65
30	I6	Intron	0	5.33	1.84	3.86	2.32	1.76	3.88	11.15
31	I6_SR1	SilentIntronRegion	1	4.56	2.72	4.45	3.94	1.04	3.63	13.42
32	I6_AR2	ActiveIntronRegion	1	4.07	0.00	5.28	3.74	0.00	8.58	11.13
33	I6_AR3	ActiveIntronRegion	0	5.23	0.00	4.76	1.94	0.61	6.85	13.04
34	I6_AR4	ActiveIntronRegion	0	7.90	2.63	4.89	2.59	2.19	5.11	12.32
35	I6_SR2	SilentIntronRegion	0	3.58	0.77	2.51	1.39	2.01	2.36	9.42
36	I6_SR2	SilentIntronRegion	0	4.66	3.90	3.70	0.83	1.60	3.32	11.33
37	I6_AR3	ActiveIntronRegion	1	6.64	2.67	0.78	1.07	0.52	0.75	10.74
38	I6_SR3	SilentIntronRegion	1	6.63	3.64	1.86	0.00	2.43	0.00	11.97
39	ER7a	ExonRegion	0	17.41	6.35	14.91	10.59	12.39	11.57	38.58
40	ER7b	ExonRegion	0	0.00	0.00	0.68	0.00	0.00	0.00	0.67
41	IG46_SR2	SilentIntergenicRegion	0	6.12	1.97	5.32	2.47	2.20	4.67	7.91
42	IG46_SR1	SilentIntergenicRegion	0	7.63	1.62	6.44	3.65	5.28	1.49	7.83