Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ASXL1	Gene	0	154.72	192.42	249.97	270.47	50.64	361.66	84.34
2	358956	Transcript	0	0	0	0	0	0	0	0
3	306058	Transcript	0	20.36	37.36	31.86	44.27	5.57	52.23	12.14
4	375689	Transcript	1	42.47	30.31	43.61	46.26	4.13	50.94	10.14
5	375687	Transcript	1	28.74	26.56	41.07	44.35	1.11	40.57	3.05
6	ER1a	ExonRegion	0	10.43	27.47	11.89	24.02	4.24	43.65	5.48
7	E1a_E3a	KnownJunction	0	79.26	103.59	102.88	118.09	30.22	147.05	31.54
8	E2_Aa	NovelBoundary	1	68.20	32.18	64.24	76.53	1.18	95.17	6.13
9	ER2a	ExonRegion	1	68.92	30.63	74.70	79.12	2.12	62.36	5.71
10	E2_Ab	KnownBoundary	1	46.16	26.82	59.00	62.23	2.10	50.76	5.04
11	ER2b	ExonRegion	0	23.89	15.10	25.62	31.85	0.70	25.77	1.79
12	E2_Da	NovelBoundary	1	60.25	29.35	59.12	66.70	0.00	45.26	5.99
13	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.45	0.00
14	I2_AR1	ActiveIntronRegion	1	32.77	13.85	53.55	25.26	1.38	27.38	3.59
15	I2_AR3	ActiveIntronRegion	1	47.09	14.33	52.10	19.40	0.92	24.12	2.91
16	ER3a	ExonRegion	0	128.38	181.89	167.36	234.01	34.51	276.13	54.08
17	E3a_E4a	KnownJunction	0	55.01	72.01	74.88	103.65	9.82	136.84	30.37
18	E3a_E5a	KnownJunction	0	0.00	0.00	1.74	0.00	0.00	3.32	0.00
19	E3a_E5b	KnownJunction	1	28.74	26.56	41.07	44.35	1.11	40.57	3.05
20	E3a_E7a	NovelJunction	1	0.00	1.52	4.61	5.58	0.00	11.31	0.00
21	E4a_E5b	KnownJunction	0	56.98	140.42	93.72	126.19	17.94	154.85	37.45
22	ER4a	ExonRegion	0	134.22	259.98	203.44	309.66	39.95	346.96	91.52
23	ER5a	ExonRegion	0	40.73	74.71	61.98	88.53	11.14	101.14	24.29
24	ER5b	ExonRegion	0	212.12	307.26	311.98	385.38	42.49	481.06	102.46
25	E5a_E6a	KnownJunction	0	29.56	42.22	20.05	39.17	6.73	62.60	13.43
26	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	I5_AR1	ActiveIntronRegion	0	31.74	7.86	24.06	7.63	1.81	8.76	4.15
28	ER6a	ExonRegion	0	28.94	18.09	36.09	20.48	3.54	27.85	11.29
29	I6_AR2	ActiveIntronRegion	0	33.30	2.83	26.53	12.47	3.24	4.90	5.40
30	I6_AR3	ActiveIntronRegion	0	55.67	4.23	43.46	8.72	2.67	5.62	8.28
31	ER7a	ExonRegion	0	159.62	264.73	262.16	382.45	47.87	456.28	93.66
32	E7a_E8a	KnownJunction	0	170.02	241.22	275.67	360.58	57.38	485.00	101.68
33	ER8a	ExonRegion	0	193.96	267.69	320.29	365.32	46.94	467.37	107.12
34	E8a_E9a	KnownJunction	0	172.04	254.47	279.10	298.92	31.95	406.93	92.55
35	ER9a	ExonRegion	0	141.94	192.01	224.76	247.32	30.80	313.35	68.77
36	E9_Da	NovelBoundary	1	193.10	81.89	247.60	167.67	10.70	133.92	20.61
37	E9a_E10a	KnownJunction	0	20.24	49.26	35.83	74.31	4.08	102.70	29.34
38	E9a_E11a	NovelJunction	0	28.66	61.48	48.92	95.63	16.57	113.98	37.62
39	I9	Intron	1	75.67	48.36	123.95	99.77	5.20	61.01	9.71
40	I9_AR1	ActiveIntronRegion	1	76.00	48.57	124.48	100.24	5.22	61.29	9.76
41	E10_Aa	NovelBoundary	1	77.57	58.64	119.85	139.25	2.03	76.73	6.89
42	ER10a	ExonRegion	0	70.70	108.03	80.89	143.33	12.41	152.17	26.53
43	E10_Da	NovelBoundary	1	31.88	20.57	69.72	48.79	5.07	16.91	3.47
44	E10a_E11a	KnownJunction	0	93.03	115.83	105.92	186.33	18.26	153.21	36.22
45	I10	Intron	1	78.32	24.58	134.85	56.32	4.25	36.37	8.86
46	I10_AR1	ActiveIntronRegion	1	78.46	24.62	135.08	56.43	4.25	36.43	8.87
47	E11_Aa	NovelBoundary	1	158.25	36.02	181.70	87.29	6.32	32.62	14.68
48	ER11a	ExonRegion	0	209.52	233.21	313.53	357.70	46.83	317.32	84.35
49	E11a_E12a	KnownJunction	0	218.91	274.59	278.71	387.05	33.73	383.99	91.12
50	ER12a	ExonRegion	0	205.39	251.91	307.25	395.33	45.80	370.14	95.86
51	E12a_E13a	KnownJunction	0	175.43	238.83	309.31	354.81	38.64	401.27	133.31
52	E12a_E14a	NovelJunction	0	7.09	15.53	3.97	5.50	0.00	5.36	0.00
53	ER13a	ExonRegion	0	193.97	278.47	345.02	383.45	53.33	427.62	118.28
54	E13a_E14a	KnownJunction	0	198.01	243.17	345.32	373.59	50.97	431.85	99.23
55	ER14a	ExonRegion	0	245.61	276.54	393.89	358.93	53.33	496.33	121.78
56	E14a_E15a	KnownJunction	0	175.34	197.77	315.56	251.57	17.13	414.65	115.11
57	ER15a	ExonRegion	0	169.18	212.01	279.43	302.71	63.29	418.44	97.41
58	IG15	Intergenic	0	33.84	16.67	8.52	7.48	39.95	8.29	24.72
59	IG15_AR2	ActiveIntergenicRegion	0	60.51	29.35	14.38	12.33	72.25	14.12	44.44