Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C20orf80	Gene	0	83.18	47.96	60.02	8.88	0.00	26.01	89.85
2	278882	Transcript	0	60.37	34.24	38.05	6.82	0.17	18.55	61.72
3	376334	Transcript	0	0.08	0.00	0.07	0.00	0.00	0.00	0.00
4	346061	Transcript	0	6.54	0.35	5.54	0.66	0.00	0.18	2.18
5	ER1a	ExonRegion	0	8.64	1.08	3.72	0.36	0.00	1.82	10.50
6	E1_Da	NovelBoundary	1	21.75	5.73	21.68	2.49	0.00	2.79	58.16
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	60.51	27.04	41.75	6.51	0.00	13.33	63.47
9	E2a_E3a	KnownJunction	0	91.21	26.03	74.44	7.26	0.00	20.37	107.41
10	E2a_E5a	NovelJunction	1	5.51	4.39	14.24	1.63	6.89	18.12	5.65
11	E2a_E6a	NovelJunction	0	1.77	8.83	1.57	0.00	0.00	4.50	0.83
12	ER3a	ExonRegion	0	235.82	139.65	132.11	23.06	0.00	64.76	207.25
13	E3_Ab	KnownBoundary	1	534.63	454.02	446.99	242.76	259.85	975.75	447.05
14	ER3b	ExonRegion	0	227.73	211.80	113.30	26.67	0.00	102.29	173.33
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E3a_E5a	NovelJunction	1	192.60	31.29	183.91	14.09	27.29	22.78	170.04
17	E3a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4a	ExonRegion	0	4.12	1.56	4.58	0.07	0.00	0.74	14.18
19	E4a_E5a	KnownJunction	0	27.40	2.71	27.03	0.00	0.00	6.24	46.73
20	ER5a	ExonRegion	0	84.15	21.23	77.13	7.41	0.00	11.20	113.10
21	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER6a	ExonRegion	0	162.89	137.36	117.23	25.31	0.00	70.98	179.45
23	E6a_E7a	KnownJunction	0	89.39	14.76	84.54	7.18	0.00	11.23	123.85
24	ER7a	ExonRegion	0	141.22	46.05	117.68	10.67	0.00	30.02	161.29
25	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER8a	ExonRegion	0	110.68	41.80	106.31	8.99	0.00	29.53	147.16
27	E8_Da	NovelBoundary	1	15.77	21.83	22.29	4.44	0.00	3.16	19.58
28	E8a_E9a	KnownJunction	1	14.29	34.60	4.89	7.48	1.20	19.62	25.62
29	I8_AR2	ActiveIntronRegion	0	25.48	8.18	22.43	1.06	0.00	3.33	18.45
30	ER9a	ExonRegion	0	12.12	11.27	9.41	3.08	0.00	9.98	17.78
31	I9	Intron	1	7.76	5.91	7.91	2.67	0.02	3.44	19.82
32	I9_SR1	SilentIntronRegion	1	7.76	5.91	7.91	2.68	0.02	3.44	19.83
33	ER10a	ExonRegion	0	0.08	0.00	0.07	0.00	0.00	0.00	0.00
34	ER11a	ExonRegion	0	13.09	0.71	11.08	1.33	0.00	0.36	4.35