Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CEP250 Gene 0 8.18 15.13 7.97 9.79 36.41 24.75 25.88 2 356095 Transcript 0 0 0 0 0 0 0 0 3 342580 Transcript 0 0.00 1.63 1.34 0.00 0.88 3.00 2.48 4 397527 Transcript 0 0.35 1.52 1.59 2.16 1.72 4.28 0.34 5 397524 Transcript 0 0.40 0.00 1.16 0.00 0.89 1.27 0.42 6 ER1a ExonRegion 0 0.00 1.82 0.41 1.91 2.49 2.15 0.39 7 ER1b ExonRegion 0 0.69 2.43 1.82 4.31 1.81 7.33 0.67 8 E1_Ab KnownBoundary 0 1.55 1.02 3.08 5.15 0.00 8.12 0.59 9 ER1c ExonRegion 0 1.71 2.59 1.97 3.35 5.59 8.81 1.92 10 E1b_E2a KnownJunction 1 0.97 0.00 0.00 3.01 0.95 8.82 0.67 11 ER1d ExonRegion 1 1.57 0.67 0.75 3.51 3.00 9.94 1.80 12 ER2a ExonRegion 1 1.83 1.32 3.71 3.48 11.42 11.64 6.82 13 E2a_E3a KnownJunction 0 0.58 2.39 5.06 3.74 11.64 8.92 9.33 14 ER3a ExonRegion 1 4.49 5.14 5.78 7.62 26.45 19.11 16.49 15 E3a_E4a KnownJunction 0 4.56 14.21 10.09 4.80 30.57 19.24 27.83 16 ER4a ExonRegion 0 3.62 12.34 6.29 7.35 20.46 13.15 17.66 17 E4a_E5a KnownJunction 0 6.71 18.89 3.15 8.24 17.89 19.03 13.51 18 ER5a ExonRegion 0 4.76 18.90 4.04 11.53 16.07 22.50 11.24 19 E5a_E6a KnownJunction 0 4.52 10.93 6.24 16.42 15.70 24.58 13.27 20 ER6a ExonRegion 0 4.13 16.33 5.13 7.78 18.97 19.20 16.92 21 E6a_E7a KnownJunction 1 4.11 22.83 7.04 4.23 24.90 18.84 21.25 22 ER7a ExonRegion 0 6.78 19.63 8.17 8.98 27.08 20.76 21.10 23 E7a_E8a KnownJunction 0 7.93 19.23 11.78 11.46 36.29 11.20 17.90 24 ER8a ExonRegion 0 5.64 16.93 5.74 12.50 25.17 18.01 22.77 25 E8a_E9a KnownJunction 0 8.34 13.45 4.87 13.30 17.87 12.44 20.34 26 ER9a ExonRegion 0 9.42 9.36 7.44 9.34 27.08 17.96 21.03 27 E9a_E10a KnownJunction 1 7.69 6.52 8.58 3.31 24.18 27.84 24.58 28 ER10a ExonRegion 0 5.16 11.13 6.82 8.42 26.47 26.54 29.04 29 E10_Da KnownBoundary 0 0.00 0.00 0.78 0.00 2.07 0.00 1.15 30 E10a_E11a KnownJunction 0 6.73 16.00 7.00 14.76 27.34 17.31 28.76 31 ER10b ExonRegion 0 0.40 0.00 1.16 0.00 0.89 1.27 0.42 32 ER11a ExonRegion 0 9.97 18.09 8.04 11.21 40.61 26.97 32.63 33 E11a_E12a KnownJunction 1 9.11 22.33 6.55 4.55 49.24 22.11 31.72 34 ER12a ExonRegion 0 8.06 17.51 10.13 8.62 35.37 21.07 33.31 35 E12a_E13a KnownJunction 0 6.61 10.72 3.39 3.31 35.32 16.46 31.20 36 ER13a ExonRegion 0 8.72 21.10 7.64 10.37 38.28 20.77 25.35 37 E13a_E14a KnownJunction 0 5.24 15.68 3.42 9.73 24.11 17.93 19.06 38 ER14a ExonRegion 0 7.60 13.34 5.60 6.95 28.24 15.82 18.37 39 E14a_E15a KnownJunction 0 3.82 15.16 3.38 8.83 21.44 14.02 16.81 40 ER15a ExonRegion 0 6.91 15.84 4.95 9.46 32.85 13.65 22.37 41 E15a_E16a KnownJunction 0 12.30 14.27 7.77 8.45 48.78 14.10 21.40 42 ER16a ExonRegion 0 15.27 19.40 10.55 8.36 40.68 20.98 31.68 43 E16a_E17a KnownJunction 0 12.60 11.17 11.70 10.40 36.58 8.82 24.68 44 ER17a ExonRegion 0 10.16 14.00 8.88 7.00 34.30 17.41 20.17 45 E17a_E18a KnownJunction 0 8.68 16.21 4.47 8.32 33.47 22.03 23.98 46 ER18a ExonRegion 0 6.79 12.94 5.10 7.66 30.95 23.29 21.39 47 E18a_E19a KnownJunction 0 10.65 12.87 6.93 6.91 31.74 19.32 22.64 48 ER19a ExonRegion 0 7.74 9.93 7.14 7.08 28.89 21.23 22.84 49 E19a_E20a KnownJunction 1 7.71 11.48 6.88 5.20 32.16 39.29 24.11 50 ER20a ExonRegion 0 13.49 10.80 8.52 8.51 40.75 29.71 23.31 51 E20a_E21a KnownJunction 0 13.15 11.01 8.81 12.84 20.13 31.84 23.45 52 E20a_E22a KnownJunction 0 0.00 1.63 1.34 0.00 0.88 3.00 2.48 53 ER21a ExonRegion 0 20.32 17.41 15.02 18.10 53.05 37.21 35.37 54 E21a_E22a KnownJunction 0 10.92 20.12 11.64 7.34 32.62 27.07 27.29 55 ER22a ExonRegion 0 16.41 14.98 11.87 13.53 47.43 24.16 33.13 56 E22a_E23a KnownJunction 0 13.70 18.86 5.88 13.55 36.86 14.85 23.59 57 ER23a ExonRegion 0 10.55 10.62 8.94 7.27 35.26 24.70 25.31 58 E23a_E24a KnownJunction 0 8.76 10.93 3.16 6.39 36.79 17.42 20.42 59 ER24a ExonRegion 0 5.95 7.13 3.91 5.43 34.44 22.80 21.07 60 E24a_E25a KnownJunction 0 4.91 16.52 7.19 5.42 42.23 20.74 36.56 61 ER25a ExonRegion 0 7.43 16.81 5.18 7.69 35.25 26.46 27.13 62 E25a_E26a KnownJunction 0 7.13 12.06 3.92 14.79 18.58 16.19 23.80 63 ER26a ExonRegion 0 4.63 14.28 4.39 9.02 20.61 15.06 20.45 64 E26a_E27a KnownJunction 0 5.76 9.06 6.01 8.24 17.66 13.83 17.37 65 ER27a ExonRegion 0 6.04 15.47 8.71 11.58 26.39 18.87 20.49 66 E27a_E28a KnownJunction 0 2.92 11.09 8.46 12.87 39.81 16.00 25.55 67 ER28a ExonRegion 0 6.99 9.44 9.06 9.06 36.29 15.85 22.48 68 E28a_E29a KnownJunction 0 5.42 9.90 12.82 10.19 35.46 14.39 24.92 69 ER29a ExonRegion 0 6.49 15.47 9.51 10.25 43.81 22.29 25.13 70 E29a_E30a KnownJunction 0 12.67 11.82 5.25 7.02 44.81 24.36 24.26 71 ER30a ExonRegion 0 10.15 19.60 10.67 12.49 47.76 32.50 33.89 72 E30a_E31a KnownJunction 0 8.06 26.25 6.68 9.73 43.41 24.71 29.25 73 E30a_E32a NovelJunction 1 1.85 1.63 0.55 0.00 0.92 9.97 2.78 74 ER31a ExonRegion 0 8.45 25.35 6.49 7.50 37.02 30.84 35.75 75 E31a_E32a KnownJunction 0 7.06 24.41 3.10 10.08 49.91 33.31 33.91 76 ER32a ExonRegion 0 8.48 24.52 7.11 13.49 51.31 37.75 35.62 77 E32a_E33a KnownJunction 0 8.58 15.97 8.18 19.86 58.72 45.13 47.44 78 ER33a ExonRegion 0 11.97 17.33 6.45 14.14 67.00 44.24 39.81 79 E33a_E34a KnownJunction 0 14.24 25.72 10.56 12.11 51.50 27.98 24.79 80 ER34a ExonRegion 0 12.29 22.78 12.23 14.44 79.89 29.21 33.29 81 E34a_E35a KnownJunction 0 10.63 21.36 12.89 14.68 77.39 28.54 40.83 82 ER35a ExonRegion 0 5.10 12.26 6.70 8.80 39.66 30.75 26.56 83 ER35b ExonRegion 0 0.00 0.61 1.35 0.00 1.62 1.23 0.00 84 IG30_SR3 SilentIntergenicRegion 0 1.95 3.57 2.85 0.87 6.36 4.30 7.33 85 IG30_SR4 SilentIntergenicRegion 0 2.10 4.29 3.08 1.68 8.42 11.01 3.66 86 IG30_AR4 ActiveIntergenicRegion 0 5.31 1.88 4.06 3.06 8.76 10.03 5.27 87 IG30_AR5 ActiveIntergenicRegion 0 6.35 2.35 4.70 3.74 9.12 10.30 5.26 88 IG30_AR6 ActiveIntergenicRegion 0 4.26 4.86 2.52 5.76 9.28 12.12 4.12