Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EIF2S2	Gene	0	309.91	411.68	481.42	672.55	625.18	538.70	632.66
2	374980	Transcript	0	679.08	796.25	1078.38	1303.48	1233.49	1090.90	1307.76
3	ER1a	ExonRegion	0	49.23	241.22	80.00	367.14	167.15	261.02	145.35
4	E1a_E2a	KnownJunction	0	93.98	377.26	159.71	373.23	9.66	399.21	285.25
5	ER2a	ExonRegion	0	654.44	894.97	995.91	1356.75	1272.71	1167.87	1337.19
6	E2a_E3a	KnownJunction	0	443.18	813.86	807.66	1250.17	812.24	1188.86	1000.73
7	ER3a	ExonRegion	0	384.33	654.73	662.77	1099.02	368.89	1104.32	689.69
8	E3a_E4a	KnownJunction	0	926.56	804.41	1580.39	1296.63	470.12	1386.86	1506.75
9	I3_AR1	ActiveIntronRegion	1	78.53	31.12	30.75	27.18	21.55	15.97	15.73
10	I3_AR2	ActiveIntronRegion	1	72.81	41.76	15.41	19.64	17.82	15.17	15.77
11	I3_AR3	ActiveIntronRegion	1	71.62	44.59	18.09	17.96	14.98	15.20	14.44
12	I3_AR4	ActiveIntronRegion	1	66.74	39.74	18.29	19.60	16.20	14.19	14.36
13	I3_AR5	ActiveIntronRegion	1	65.40	38.47	20.02	23.97	18.09	13.21	13.79
14	I3_SR1	SilentIntronRegion	0	64.66	23.63	29.64	19.21	20.22	12.19	12.73
15	ER4a	ExonRegion	0	857.31	983.94	1324.00	1403.52	1315.03	1241.34	1448.16
16	E4a_E5a	KnownJunction	0	1660.10	1622.02	2406.40	2447.46	2280.89	2105.31	2512.67
17	ER5a	ExonRegion	0	675.17	899.39	1075.17	1321.21	927.53	1065.00	1261.81
18	E5a_E6a	KnownJunction	0	540.60	704.99	913.71	1246.73	347.43	983.79	1118.37
19	ER6a	ExonRegion	0	891.35	595.62	1336.88	1078.97	1856.71	878.55	1538.28
20	E6a_E7a	KnownJunction	0	1002.51	823.43	1632.82	1546.98	2323.89	1281.83	1947.18
21	E6a_E8a	NovelJunction	0	34.33	77.03	65.05	226.13	86.70	192.77	47.55
22	ER7a	ExonRegion	0	801.69	896.22	1340.20	1638.05	2015.34	1273.10	1808.88
23	E7_Da	NovelBoundary	1	86.87	24.41	36.83	17.23	12.96	13.37	19.09
24	E7a_E8a	KnownJunction	0	602.26	817.46	890.00	1381.51	1542.44	966.56	1294.73
25	ER8a	ExonRegion	0	715.14	985.74	1144.33	1707.89	1285.59	1295.04	1640.11
26	E8a_E9a	KnownJunction	0	1113.20	1204.34	1779.46	2271.53	3629.16	1674.72	2380.21
27	ER9a	ExonRegion	0	133.37	216.68	203.05	372.29	344.52	271.96	316.61
28	IG50	Intergenic	0	31.88	33.94	19.22	16.80	5.37	9.39	11.88
29	IG50_SR6	SilentIntergenicRegion	0	26.52	16.42	15.34	9.79	2.23	5.12	5.65
30	IG50_SR5	SilentIntergenicRegion	0	21.12	19.14	14.16	11.92	6.63	6.37	8.11
31	IG50_AR5	ActiveIntergenicRegion	0	34.40	49.12	22.41	28.10	8.44	18.80	20.02
32	IG50_SR4	SilentIntergenicRegion	0	38.09	68.20	22.76	29.69	11.12	18.33	22.18
33	IG50_AR4	ActiveIntergenicRegion	0	44.38	57.55	26.12	24.20	7.48	13.83	18.10
34	IG50_SR3	SilentIntergenicRegion	0	34.48	43.56	23.61	17.10	6.53	9.23	16.34
35	IG50_AR3	ActiveIntergenicRegion	0	30.28	42.58	22.08	14.71	5.43	15.39	12.08
36	IG50_SR2	SilentIntergenicRegion	0	40.03	54.88	27.34	19.79	7.20	8.03	20.63
37	IG50_AR2	ActiveIntergenicRegion	0	42.86	47.75	25.98	16.98	6.85	4.67	24.39
38	IG50_SR1	SilentIntergenicRegion	0	38.86	30.72	22.16	11.40	6.36	3.68	18.98
39	IG50_AR1	ActiveIntergenicRegion	0	25.01	24.34	14.17	13.85	5.63	4.47	8.79