Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MMP24	Gene	0	6.68	17.20	18.04	6.29	103.30	4.41	27.05
2	246186	Transcript	1	1.81	4.91	16.78	2.33	95.17	1.67	7.20
3	IG24_AR1	ActiveIntergenicRegion	0	2.08	1.28	4.12	1.53	8.69	1.29	5.79
4	ER1a	ExonRegion	0	0.00	0.03	1.12	0.00	12.44	0.00	0.27
5	E1a_E2a	KnownJunction	0	0.00	0.00	6.90	0.00	70.56	0.00	0.89
6	ER2a	ExonRegion	1	0.00	1.75	18.60	0.66	78.71	0.00	3.83
7	E2a_E3a	KnownJunction	1	0.00	0.00	18.52	0.00	78.13	0.00	3.51
8	E3_Aa	NovelBoundary	1	1.65	0.00	0.89	0.00	1.11	1.50	10.18
9	ER3a	ExonRegion	1	0.11	0.81	27.32	1.50	157.11	1.16	4.75
10	E3a_E4a	KnownJunction	1	0.73	0.00	35.65	1.06	312.78	1.66	1.25
11	ER4a	ExonRegion	1	1.66	2.12	26.40	2.64	164.69	1.39	5.82
12	E4a_E5a	KnownJunction	1	0.65	0.00	30.81	1.65	116.60	0.00	4.04
13	E5_Aa	NovelBoundary	1	7.14	29.37	3.33	4.33	0.85	12.97	34.42
14	ER5a	ExonRegion	0	6.23	13.02	17.10	6.27	92.66	6.34	21.21
15	E5_Da	NovelBoundary	1	12.62	21.23	3.16	7.34	13.44	8.66	36.00
16	E5a_E6a	KnownJunction	1	0.58	0.00	15.79	1.16	57.77	0.00	1.86
17	I5	Intron	1	6.72	25.00	3.88	9.82	5.31	6.80	23.50
18	I5_AR1	ActiveIntronRegion	1	7.96	32.17	4.24	15.92	8.75	9.78	30.20
19	I5_AR2	ActiveIntronRegion	1	15.51	66.69	8.65	22.80	7.82	16.15	55.72
20	E6_Aa	NovelBoundary	1	6.96	26.03	2.14	18.18	0.00	8.95	14.98
21	ER6a	ExonRegion	0	5.48	27.30	11.17	11.32	51.27	8.17	17.32
22	E6_Da	NovelBoundary	1	7.44	41.69	5.91	17.26	4.59	15.01	37.63
23	E6a_E7a	KnownJunction	1	0.00	0.00	11.02	0.00	41.52	0.00	0.00
24	I6	Intron	1	4.63	20.87	2.37	7.34	1.95	5.17	14.82
25	I6_AR1	ActiveIntronRegion	1	8.28	43.90	4.84	16.42	3.39	17.59	34.45
26	I6_SR1	SilentIntronRegion	1	8.95	38.18	3.46	18.24	4.00	7.76	19.79
27	I6_AR2	ActiveIntronRegion	1	6.19	27.58	2.17	16.07	1.32	5.25	16.40
28	I6_SR2	SilentIntronRegion	0	2.37	9.08	1.35	1.27	1.10	0.56	7.24
29	E7_Aa	NovelBoundary	1	2.04	14.06	0.66	2.47	1.96	0.00	13.60
30	ER7a	ExonRegion	0	2.24	4.00	9.81	2.67	57.62	0.68	6.27
31	E7_Da	NovelBoundary	1	1.57	16.60	0.86	3.96	2.03	0.00	8.83
32	E7a_E8a	KnownJunction	1	0.00	0.00	10.45	0.00	59.08	0.00	0.00
33	I7	Intron	1	5.40	16.65	2.33	3.11	2.84	3.54	17.37
34	I7_SR1	SilentIntronRegion	1	5.41	16.68	2.34	3.12	2.84	3.55	17.42
35	E8_Aa	NovelBoundary	1	3.66	28.92	1.58	5.72	2.07	5.71	25.61
36	ER8a	ExonRegion	0	4.45	12.79	13.03	3.20	66.19	3.81	12.89
37	E8_Da	NovelBoundary	1	5.87	14.84	1.48	4.96	0.90	1.15	13.67
38	E8a_E9a	KnownJunction	1	0.00	0.00	12.73	0.00	90.92	0.00	2.15
39	I8	Intron	1	6.10	14.50	1.90	4.24	2.66	3.26	12.30
40	I8_SR1	SilentIntronRegion	1	9.01	13.07	3.05	6.16	2.34	3.63	15.95
41	I8_AR1	ActiveIntronRegion	1	16.65	56.87	7.32	20.11	4.55	23.82	36.59
42	I8_SR2	SilentIntronRegion	1	4.61	10.17	1.17	2.30	2.50	1.01	9.25
43	E9_Aa	NovelBoundary	1	9.91	15.21	1.57	7.37	0.00	4.23	12.50
44	ER9a	ExonRegion	0	8.72	21.68	18.86	7.55	109.79	5.14	36.27
45	IG25	Intergenic	0	26.84	72.36	9.12	16.91	19.15	27.04	144.68
46	IG25_AR1	ActiveIntergenicRegion	0	29.65	80.62	9.45	17.82	21.51	30.71	160.71
47	IG25_SR1	SilentIntergenicRegion	0	9.69	21.45	7.38	11.73	4.46	4.14	46.60