Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PLCG1	Gene	0	41.77	27.02	64.08	41.78	255.43	32.52	88.91
2	244007	Transcript	0	0.00	0.55	0.00	2.98	0.00	1.68	0.36
3	373271	Transcript	0	19.63	8.51	23.50	16.77	120.77	9.94	22.30
4	373272	Transcript	0	0	0	0	0	0	0	0
5	IG45_SR1	SilentIntergenicRegion	0	5.94	3.33	2.86	9.40	1.23	5.46	1.72
6	IG45_AR3	ActiveIntergenicRegion	0	0.56	0.00	0.49	1.71	7.74	1.63	0.00
7	ER1a	ExonRegion	0	0.00	0.00	0.00	2.36	0.00	0.74	0.00
8	E1a_E2b	KnownJunction	0	0.00	1.10	0.00	3.60	0.00	2.63	0.72
9	ER2a	ExonRegion	0	0.00	0.65	0.00	0.01	0.14	0.44	0.95
10	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.47	1.49
11	ER2b	ExonRegion	0	7.18	9.69	11.41	9.94	30.61	7.43	17.13
12	E2a_E3a	KnownJunction	0	19.84	21.83	33.84	27.04	128.63	28.25	55.84
13	ER3a	ExonRegion	0	43.96	34.29	71.92	48.40	187.54	53.49	87.82
14	E3a_E4a	KnownJunction	0	51.57	32.84	87.40	45.05	190.81	70.43	116.97
15	ER4a	ExonRegion	0	47.62	41.49	83.89	63.75	244.12	69.46	112.29
16	E4a_E5a	KnownJunction	0	47.12	47.42	73.46	54.97	234.06	39.15	94.00
17	ER5a	ExonRegion	0	60.00	40.80	92.19	60.76	249.35	44.42	122.16
18	E5a_E6a	KnownJunction	0	61.12	19.91	91.60	57.30	251.97	37.04	115.94
19	E6_Aa	NovelBoundary	0	9.15	2.55	10.42	13.92	7.12	6.97	3.20
20	ER6a	ExonRegion	0	43.95	34.29	64.97	57.79	245.09	34.66	94.84
21	E6a_E7a	KnownJunction	0	23.53	14.21	46.34	40.23	141.13	22.43	67.83
22	ER7a	ExonRegion	0	24.06	23.91	56.15	43.72	185.09	23.08	65.44
23	E7_Da	NovelBoundary	0	31.86	18.15	24.43	28.39	43.85	25.54	40.93
24	E7a_E8a	KnownJunction	1	19.51	15.11	37.55	38.88	158.72	12.60	50.27
25	I7	Intron	0	9.10	7.56	8.59	8.49	35.19	4.02	9.63
26	I7_SR1	SilentIntronRegion	0	9.16	7.63	8.65	8.54	35.38	4.05	9.71
27	E8_Aa	NovelBoundary	0	9.50	8.49	8.10	1.41	24.34	4.82	11.55
28	ER8a	ExonRegion	0	18.66	21.62	47.47	39.51	178.26	17.16	57.80
29	E8a_E9a	KnownJunction	0	18.44	17.79	46.14	30.67	183.89	18.73	52.85
30	E9_Aa	NovelBoundary	0	9.78	9.77	10.92	8.45	23.24	13.24	6.49
31	ER9a	ExonRegion	0	29.80	19.85	59.47	45.30	235.16	29.09	88.94
32	E9_Da	NovelBoundary	0	8.58	3.26	7.99	13.38	13.58	6.54	10.07
33	E9a_E10a	KnownJunction	0	34.65	25.40	67.38	52.07	185.44	24.44	109.54
34	E10_Aa	NovelBoundary	0	15.52	6.36	13.31	10.27	18.86	13.45	14.20
35	ER10a	ExonRegion	0	29.63	40.94	64.79	58.82	211.12	34.69	96.96
36	E10a_E11a	KnownJunction	0	30.94	37.12	74.05	37.03	244.80	38.62	105.11
37	ER11a	ExonRegion	0	51.98	48.98	99.67	63.69	315.41	46.31	168.34
38	E11a_E12a	KnownJunction	0	48.98	38.91	72.71	63.45	286.36	37.25	141.62
39	ER12a	ExonRegion	0	51.14	35.54	82.66	65.58	277.50	30.65	133.20
40	E12a_E13a	KnownJunction	0	57.98	33.68	92.53	67.38	297.64	34.12	144.16
41	ER13a	ExonRegion	0	51.09	37.38	95.98	64.11	362.06	37.45	162.23
42	E13a_E14a	KnownJunction	0	54.51	35.65	86.61	73.06	303.97	39.10	146.73
43	ER14a	ExonRegion	0	50.19	32.94	90.04	61.32	320.97	30.82	138.79
44	E14a_E15a	KnownJunction	0	28.71	32.31	65.93	48.06	263.86	33.12	93.67
45	ER15a	ExonRegion	0	38.96	40.12	79.74	59.33	294.09	39.63	131.41
46	E15a_E16a	KnownJunction	0	48.07	34.15	90.89	69.08	412.25	38.62	153.95
47	ER16a	ExonRegion	0	34.26	38.02	67.87	61.88	259.05	44.74	119.87
48	E16a_E17a	KnownJunction	0	41.31	36.39	63.83	43.54	263.82	33.15	115.10
49	ER17a	ExonRegion	0	36.80	33.72	61.30	43.83	230.24	36.43	103.06
50	E17a_E18a	KnownJunction	0	34.98	30.71	55.64	38.77	175.32	31.81	96.69
51	ER18a	ExonRegion	0	32.89	38.92	62.85	55.82	252.79	36.26	102.04
52	E18a_E19a	KnownJunction	1	41.91	31.60	73.86	60.12	289.68	21.49	117.09
53	ER19a	ExonRegion	0	31.16	37.56	65.05	64.49	291.51	27.13	127.44
54	E19a_E20a	KnownJunction	0	38.12	23.93	63.69	61.74	265.87	31.97	99.63
55	ER20a	ExonRegion	0	40.22	35.37	75.68	58.37	337.23	34.94	129.76
56	E20a_E21a	KnownJunction	0	31.24	29.56	51.89	39.20	262.36	15.54	73.86
57	E20a_E22a	NovelJunction	0	0.00	1.34	0.66	7.69	0.00	10.53	0.64
58	ER21a	ExonRegion	0	42.45	26.10	65.38	43.52	291.80	27.18	100.63
59	E21a_E22a	KnownJunction	0	44.26	30.55	76.59	62.07	326.75	32.80	120.87
60	ER22a	ExonRegion	0	41.21	23.06	68.54	55.38	307.86	29.35	100.21
61	E22a_E23a	KnownJunction	1	47.15	8.25	56.37	34.70	261.40	23.74	65.31
62	E23_Aa	NovelBoundary	1	6.36	6.41	6.32	25.84	2.03	9.92	3.27
63	ER23a	ExonRegion	0	56.63	30.31	67.77	52.13	278.84	37.83	77.31
64	E23a_E24a	KnownJunction	0	45.30	30.19	70.56	56.59	284.10	34.54	89.57
65	ER24a	ExonRegion	0	37.96	25.36	66.49	44.34	227.95	27.60	82.32
66	E24a_E25a	KnownJunction	0	40.04	26.38	61.26	30.15	203.35	20.80	63.16
67	ER25a	ExonRegion	0	52.26	24.12	76.89	37.64	309.03	29.27	81.52
68	E25a_E26a	KnownJunction	0	63.17	23.80	92.56	38.88	320.67	44.09	109.46
69	E25a_E27a	NovelJunction	0	5.89	11.14	8.48	5.17	3.04	7.26	9.73
70	ER26a	ExonRegion	0	57.33	28.13	88.26	54.71	404.89	47.03	130.98
71	E26a_E27a	KnownJunction	0	57.80	34.52	81.42	36.33	373.25	58.96	119.77
72	ER27a	ExonRegion	0	58.86	45.01	90.28	53.38	415.73	60.36	143.20
73	E27a_E28a	KnownJunction	1	35.85	13.58	55.04	35.49	246.85	42.53	75.48
74	ER28a	ExonRegion	0	36.26	27.56	56.43	40.35	309.90	40.28	94.87
75	E28a_E29a	KnownJunction	0	52.49	27.16	60.00	35.44	285.60	33.77	84.20
76	ER29a	ExonRegion	0	55.05	29.93	68.79	35.44	368.00	29.50	95.22
77	E29a_E30a	KnownJunction	0	57.63	38.62	81.52	34.13	515.72	30.61	117.72
78	ER30a	ExonRegion	0	97.32	33.98	112.90	66.19	489.73	42.21	141.03
79	E30a_E31a	KnownJunction	0	102.06	40.30	124.35	50.23	461.84	38.75	150.26
80	ER31a	ExonRegion	0	95.05	28.00	117.90	60.53	531.78	44.44	125.34
81	E31a_E32a	KnownJunction	0	53.21	17.08	78.26	48.85	321.33	27.17	74.81
82	E31a_E32b	KnownJunction	0	19.63	8.51	23.50	16.77	120.77	9.94	22.30
83	ER32a	ExonRegion	0	58.59	19.44	85.18	52.68	332.65	35.25	82.47
84	ER32b	ExonRegion	0	62.30	28.00	90.78	48.23	305.34	49.34	89.40
85	E32a_E33a	KnownJunction	0	43.19	24.85	73.16	47.57	245.86	39.56	59.06
86	ER33a	ExonRegion	0	44.58	20.05	57.41	27.87	241.40	29.02	64.11
87	IG46_SR1	SilentIntergenicRegion	0	7.63	1.62	6.44	3.65	5.28	1.49	7.83
88	IG46_SR2	SilentIntergenicRegion	0	6.12	1.97	5.32	2.47	2.20	4.67	7.91