Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 TGIF2 Gene 0 57.29 148.86 65.58 206.45 178.32 242.02 6.92 2 373874 Transcript 0 0.34 2.13 0.00 2.18 5.44 0.13 0.32 3 373872 Transcript 0 3.05 25.44 2.80 36.30 15.53 56.90 0.00 4 IG48 Intergenic 0 0.78 1.01 7.61 17.49 5.22 2.00 1.88 5 IG48_AR1 ActiveIntergenicRegion 0 1.17 2.49 19.62 56.06 8.21 4.12 6.48 6 IG48_SR1 SilentIntergenicRegion 0 2.30 1.40 31.61 72.44 10.60 6.66 10.07 7 IG48_AR2 ActiveIntergenicRegion 0 3.30 4.09 38.19 88.16 13.12 10.39 10.17 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.54 1.00 0.26 0.00 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 3.01 3.23 1.47 0.00 10 ER1b ExonRegion 0 0.31 8.32 0.06 16.60 8.46 18.53 0.21 11 E1_Da KnownBoundary 0 0.00 18.97 0.57 39.01 7.49 59.01 0.00 12 E1a_E2a KnownJunction 0 0.68 4.26 0.00 3.82 9.89 0.00 0.64 13 ER1c ExonRegion 0 2.03 21.83 2.02 27.47 9.47 50.50 0.00 14 E1b_E2a KnownJunction 0 4.07 29.06 3.58 45.13 21.58 63.30 0.00 15 I1_AR1 ActiveIntronRegion 0 3.36 7.98 3.97 2.04 47.62 3.22 0.00 16 E2_Aa NovelBoundary 0 17.92 9.20 10.81 21.54 4.22 13.11 0.00 17 ER2a ExonRegion 0 28.10 155.99 43.48 212.92 94.74 320.61 5.93 18 E2a_E3a KnownJunction 0 25.65 215.56 51.53 252.84 135.37 390.20 8.07 19 I2_AR1 ActiveIntronRegion 0 15.44 21.41 13.40 17.81 16.84 11.99 1.38 20 I2_AR3 ActiveIntronRegion 0 20.20 18.92 13.35 7.48 20.25 11.03 0.39 21 I2_AR5 ActiveIntronRegion 0 26.23 19.57 22.50 20.47 16.98 24.60 0.63 22 ER3a ExonRegion 0 64.26 160.16 72.73 222.38 199.21 254.89 7.58 23 IG49 Intergenic 0 5.25 4.54 3.34 9.43 2.17 9.66 0.19 24 IG49_AR1 ActiveIntergenicRegion 0 14.06 6.53 7.98 15.52 6.37 11.38 0.27 25 IG49_SR1 SilentIntergenicRegion 0 5.27 3.64 3.39 14.79 2.43 9.63 0.00 26 IG49_AR2 ActiveIntergenicRegion 0 4.61 3.64 3.39 12.78 2.43 7.66 0.00 27 IG49_AR3 ActiveIntergenicRegion 0 3.12 5.87 3.57 13.75 2.37 14.93 0.16 28 IG49_SR3 SilentIntergenicRegion 0 7.44 6.47 4.17 14.32 2.27 14.46 0.42