Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HM13	Gene	0	390.73	806.25	308.96	751.09	500.33	1809.06	633.71
2	398174	Transcript	0	2.15	15.07	3.15	8.76	2.12	24.88	3.91
3	335574	Transcript	0	10.96	29.71	2.71	16.08	4.05	72.25	17.97
4	340852	Transcript	0	0	0	0	0	0	0	0
5	344042	Transcript	0	10.29	39.17	10.93	38.69	18.03	99.62	13.28
6	398164	Transcript	0	0	0	0	0	0	0	0
7	376127	Transcript	1	7.36	6.96	13.42	15.39	22.55	10.26	62.48
8	ER1a	ExonRegion	0	0.70	1.55	0.80	0.00	3.09	2.34	3.19
9	ER1b	ExonRegion	0	3.03	7.37	2.37	1.71	10.58	6.82	8.39
10	ER1c	ExonRegion	0	141.39	543.44	89.42	494.10	212.29	1061.82	309.98
11	E1a_E2a	KnownJunction	0	331.06	957.12	228.70	887.94	594.79	2560.96	605.45
12	ER2a	ExonRegion	0	267.94	919.28	222.27	787.84	412.39	2260.12	471.60
13	E2a_E3a	KnownJunction	0	282.78	856.29	277.40	698.98	256.92	2069.29	474.17
14	E2a_E7a	NovelJunction	0	3.47	26.48	1.45	11.19	4.36	36.21	4.16
15	ER3a	ExonRegion	0	380.04	1183.62	372.11	1098.03	403.68	3107.74	739.88
16	E3_Da	KnownBoundary	0	27.17	74.35	16.47	79.73	18.40	175.16	26.79
17	E3a_E4a	KnownJunction	0	421.89	898.77	371.89	767.90	418.69	2266.94	675.77
18	E3a_E7a	NovelJunction	0	4.11	47.68	3.79	83.09	1.08	142.25	1.38
19	ER3b	ExonRegion	0	10.29	39.17	10.93	38.69	18.03	99.62	13.28
20	ER4a	ExonRegion	0	475.63	1068.88	440.79	878.31	494.05	2522.74	795.53
21	E4a_E5a	KnownJunction	0	502.13	1205.57	473.75	1025.13	628.33	2815.85	945.69
22	ER5a	ExonRegion	0	542.11	1135.44	504.19	1001.89	738.99	2590.59	1000.65
23	E5a_E6a	KnownJunction	0	600.42	1165.66	504.30	1012.23	831.12	2482.44	955.93
24	E5a_E7a	KnownJunction	1	7.36	6.96	13.42	15.39	22.55	10.26	62.48
25	ER6a	ExonRegion	0	723.32	1310.78	604.45	1175.56	1132.96	2916.29	1184.67
26	E6a_E7a	KnownJunction	0	1114.64	1326.68	830.15	1209.81	1334.34	2914.85	1551.28
27	ER7a	ExonRegion	0	1239.83	1617.50	892.81	1518.74	1333.94	3612.95	1669.84
28	E7a_E8a	KnownJunction	0	1140.71	1652.76	764.30	1603.85	1346.93	3939.83	1338.66
29	E7a_E9a	NovelJunction	0	10.21	84.80	24.75	145.26	34.05	363.11	26.73
30	ER8a	ExonRegion	0	1039.05	1737.23	776.77	1669.25	1110.44	3780.84	1488.95
31	E8a_E9a	KnownJunction	0	865.51	1530.52	711.73	1575.70	1078.69	3356.13	1710.78
32	ER9a	ExonRegion	0	1117.95	1718.89	886.20	1727.31	1572.29	3812.39	1919.73
33	E9a_E10a	KnownJunction	0	809.09	1193.20	601.73	1252.85	1839.29	2750.81	1079.57
34	ER10a	ExonRegion	0	869.00	1331.64	613.85	1307.63	1239.93	2894.29	1222.04
35	E10a_E11a	KnownJunction	0	578.06	1140.52	444.52	954.47	1025.16	2379.77	905.99
36	E10a_E13a	NovelJunction	1	41.21	82.81	77.86	311.17	39.65	458.09	70.48
37	ER11a	ExonRegion	0	441.80	971.29	324.66	829.42	661.63	1973.97	754.67
38	E11a_E12a	KnownJunction	1	14.40	107.50	7.33	74.26	4.91	177.76	44.71
39	E11a_E13a	KnownJunction	0	416.96	805.72	269.00	710.14	656.48	1748.60	646.76
40	ER12a	ExonRegion	0	16.57	101.87	10.30	63.55	12.43	170.63	45.82
41	E12_Da	KnownBoundary	0	5.16	23.78	5.30	23.05	3.09	39.77	20.72
42	E12a_E13a	KnownJunction	0	3.84	38.80	6.62	21.29	2.05	60.65	7.85
43	E12_Db	KnownBoundary	0	6.08	24.41	2.67	1.11	2.33	34.20	12.98
44	ER12b	ExonRegion	0	8.07	52.24	6.77	28.68	6.88	81.53	31.37
45	ER12c	ExonRegion	0	10.83	36.73	3.99	19.86	6.04	80.68	22.43
46	E12c_E13a	KnownJunction	0	11.08	22.70	1.44	12.30	2.05	63.81	13.51
47	E13_Aa	NovelBoundary	1	170.25	23.78	111.11	4.69	1.04	17.85	5.56
48	ER13a	ExonRegion	0	291.75	636.30	234.71	656.32	325.18	1483.98	461.22
49	ER13b	ExonRegion	0	12.68	31.33	16.00	33.04	14.04	53.28	15.29
50	ER13c	ExonRegion	0	1.92	4.86	2.03	4.99	1.21	11.65	0.67
51	IG44	Intergenic	0	9.31	39.33	9.25	35.97	3.69	82.16	17.57
52	IG44_SR1	SilentIntergenicRegion	0	14.57	49.49	20.20	53.95	5.96	115.54	27.43
53	IG44_AR1	ActiveIntergenicRegion	0	14.93	79.45	22.26	75.95	7.10	153.69	39.41
54	IG44_SR2	SilentIntergenicRegion	0	23.50	61.83	18.86	45.79	5.31	104.86	27.19
55	IG44_AR2	ActiveIntergenicRegion	0	11.88	57.54	16.43	55.19	3.04	119.37	29.84
56	IG44_SR4	SilentIntergenicRegion	0	5.09	24.11	3.11	19.99	2.31	55.16	8.10
57	IG44_AR5	ActiveIntergenicRegion	0	3.19	24.92	2.17	13.62	0.52	47.34	4.26
58	IG44_SR5	SilentIntergenicRegion	0	6.83	16.72	1.67	17.38	3.68	42.52	6.48