Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EPB41L1	Gene	0	81.48	18.84	5.55	2.15	36.25	6.95	21.02
2	202028	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	397290	Transcript	0	0.19	0.00	0.00	0.00	0.00	0.00	0.00
4	373950	Transcript	0	0	0	0	0	0	0	0
5	397307	Transcript	0	1.15	0.31	0.16	0.00	0.00	0.00	0.16
6	406771	Transcript	0	9.59	0.64	0.45	0.00	0.00	0.80	1.24
7	373951	Transcript	0	0	0	0	0	0	0	0
8	373946	Transcript	0	20.94	6.62	0.79	0.56	26.26	1.30	2.82
9	397315	Transcript	0	0	0	0	0	0	0	0
10	338074	Transcript	0	0	0	0	0	0	0	0
11	344237	Transcript	0	2.98	0.31	0.14	0.02	0.02	0.00	0.52
12	397314	Transcript	0	0	0	0	0	0	0	0
13	373945	Transcript	0	0.72	0.00	1.91	0.00	12.89	2.84	0.00
14	373941	Transcript	0	0	0	0	0	0	0	0
15	406722	Transcript	0	81.20	0.00	7.54	0.00	0.00	0.00	0.56
16	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER2a	ExonRegion	0	1.40	0.85	0.00	0.76	0.00	0.00	1.88
19	ER2b	ExonRegion	0	4.61	3.64	0.00	2.49	0.00	0.00	7.02
20	E2_Ac	KnownBoundary	0	5.29	5.31	0.00	2.82	0.00	0.00	8.67
21	ER2c	ExonRegion	0	4.25	2.47	0.00	1.56	0.00	0.00	5.78
22	E2a_E3a	KnownJunction	0	2.69	0.00	0.00	0.00	0.00	0.00	2.15
23	E2a_E4a	KnownJunction	0	0.58	0.00	0.00	0.00	0.00	0.00	0.00
24	E3_Aa	NovelBoundary	1	23.45	16.55	0.63	0.00	0.00	0.00	1.15
25	ER3a	ExonRegion	0	20.17	2.72	1.11	0.45	0.66	0.00	3.54
26	E3a_E5a	KnownJunction	0	11.37	0.00	0.52	0.00	0.00	0.00	1.83
27	E3a_E8a	KnownJunction	0	19.18	1.29	0.89	0.00	0.00	1.61	2.48
28	E3a_E9a	KnownJunction	0	21.56	7.72	0.89	1.38	0.00	0.00	3.25
29	ER4a	ExonRegion	0	2.86	0.93	0.48	0.00	0.00	0.00	0.47
30	E4a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER5a	ExonRegion	0	11.55	0.59	1.01	0.60	0.28	0.00	3.87
32	E5a_E9a	KnownJunction	0	0.00	0.00	1.60	0.00	0.00	0.00	0.56
33	ER6a	ExonRegion	0	4.62	1.03	0.00	0.00	0.00	0.00	1.16
34	E6a_E9a	KnownJunction	0	8.16	1.05	0.00	0.00	0.00	0.00	0.00
35	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER7b	ExonRegion	0	0.69	0.00	0.18	0.00	5.71	3.38	0.00
37	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	6.32	1.39	0.00
38	E7a_E9a	KnownJunction	0	0.72	0.00	1.91	0.00	12.89	2.84	0.00
39	E8_Ac	NovelBoundary	0	25.35	8.12	1.85	0.00	4.79	1.29	6.65
40	ER8a	ExonRegion	0	19.72	5.26	0.68	0.00	5.80	1.23	2.47
41	ER8b	ExonRegion	0	23.14	7.69	0.68	0.00	7.02	1.23	3.30
42	ER8c	ExonRegion	0	38.31	16.51	2.12	0.72	10.62	4.74	10.82
43	E8a_E9a	KnownJunction	0	71.40	27.90	4.70	2.19	21.21	10.51	23.12
44	ER9a	ExonRegion	0	119.62	35.16	9.22	2.76	43.25	15.40	38.98
45	E9a_E10a	KnownJunction	0	149.34	36.70	19.34	4.20	60.35	11.95	33.75
46	E9a_E11a	KnownJunction	0	2.74	1.55	1.71	0.00	0.00	1.58	0.00
47	ER10a	ExonRegion	0	129.08	42.81	10.53	2.64	69.38	15.24	37.58
48	E10a_E11a	KnownJunction	0	102.04	37.52	8.51	1.49	59.85	23.37	34.60
49	ER10b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER11a	ExonRegion	0	123.95	43.40	13.99	4.29	66.26	16.25	39.44
51	E11a_E12a	KnownJunction	0	134.77	37.91	12.26	6.18	68.01	4.61	34.57
52	ER12a	ExonRegion	0	145.69	44.45	11.58	4.40	63.00	13.58	29.31
53	E12a_E13a	KnownJunction	0	112.82	45.92	8.21	3.17	62.06	15.49	26.20
54	ER13a	ExonRegion	0	115.11	42.64	9.75	4.88	76.97	15.26	31.44
55	E13a_E14a	KnownJunction	0	150.63	50.41	12.29	6.96	100.95	16.72	51.11
56	ER14a	ExonRegion	0	185.33	59.10	19.42	5.82	109.01	20.65	60.35
57	E14a_E15a	KnownJunction	0	161.27	55.85	11.91	4.52	107.31	30.52	65.35
58	ER15a	ExonRegion	0	181.70	56.77	17.73	4.65	106.83	21.19	69.72
59	E15a_E16a	KnownJunction	0	208.14	51.15	19.79	2.76	126.35	19.27	80.14
60	ER16a	ExonRegion	0	178.78	44.63	14.63	1.93	116.58	17.81	64.46
61	E16a_E17a	KnownJunction	0	122.52	41.01	7.50	3.14	97.70	7.77	48.98
62	ER17a	ExonRegion	0	132.02	45.29	7.64	3.62	74.29	6.74	44.05
63	E17a_E18a	KnownJunction	0	146.49	53.20	5.45	6.31	89.72	8.60	33.87
64	ER18a	ExonRegion	0	124.59	52.80	7.86	3.61	64.97	13.87	35.75
65	E18a_E19a	KnownJunction	0	6.04	0.00	0.00	0.00	0.00	8.07	0.69
66	E18a_E20a	KnownJunction	0	113.58	46.19	5.40	4.74	42.53	17.69	28.94
67	ER19a	ExonRegion	0	3.99	1.25	0.70	0.00	0.85	5.69	0.94
68	E19a_E20a	KnownJunction	0	1.95	2.60	0.80	0.00	1.01	0.00	1.32
69	ER20a	ExonRegion	0	112.02	34.06	6.76	1.42	61.65	12.11	31.03
70	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
71	E20a_E24a	KnownJunction	0	14.82	6.28	2.69	1.19	12.59	7.08	16.71
72	E20a_E25a	KnownJunction	0	50.04	17.79	2.37	1.68	78.79	3.89	7.29
73	ER21a	ExonRegion	0	3.16	0.88	0.00	0.00	0.00	0.00	0.49
74	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
75	ER22a	ExonRegion	0	11.44	0.43	0.69	0.15	0.11	0.00	1.30
76	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
77	ER23a	ExonRegion	0	6.26	0.84	0.29	0.00	0.00	0.00	1.87
78	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
79	ER24a	ExonRegion	0	42.61	7.34	3.85	4.30	13.66	9.58	28.46
80	E24a_E25a	KnownJunction	0	69.68	10.09	4.57	2.49	21.37	6.41	31.64
81	ER25a	ExonRegion	0	161.23	33.58	14.01	3.95	99.91	12.89	51.24
82	E25a_E26a	KnownJunction	0	65.76	3.21	0.60	0.00	25.08	3.81	13.50
83	E25a_E26b	KnownJunction	0	67.91	10.04	8.05	0.00	45.83	1.10	24.03
84	E25a_E27a	KnownJunction	0	37.62	12.35	5.99	4.85	27.50	7.10	13.39
85	ER26a	ExonRegion	0	87.22	9.11	4.23	0.00	40.09	4.29	22.26
86	ER26b	ExonRegion	0	121.60	23.52	7.25	2.24	37.44	9.55	47.49
87	E26a_E27a	KnownJunction	0	68.16	20.94	3.91	3.82	24.23	15.17	30.18
88	E26a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
89	ER27a	ExonRegion	0	119.78	36.56	10.71	6.59	70.12	14.91	46.51
90	E27a_E28a	KnownJunction	0	219.09	41.40	16.05	1.16	106.20	8.42	76.73
91	ER28a	ExonRegion	0	260.81	56.77	19.81	5.51	172.67	18.13	89.41
92	E28a_E29a	KnownJunction	0	164.75	47.24	12.03	6.12	82.92	24.39	64.18
93	ER29a	ExonRegion	0	195.13	55.66	17.92	4.13	129.17	26.84	72.15
94	E29a_E30a	KnownJunction	0	225.48	63.16	23.57	2.76	138.80	19.11	54.73
95	ER30a	ExonRegion	0	284.12	66.96	17.04	5.03	137.07	28.24	77.65
96	E30a_E32a	KnownJunction	0	321.78	69.20	24.14	7.31	130.27	20.23	64.43
97	ER31a	ExonRegion	0	0.38	0.00	0.00	0.00	0.00	0.00	0.00
98	ER32a	ExonRegion	0	310.28	73.43	24.24	7.48	134.80	25.75	69.93
99	ER32b	ExonRegion	0	202.60	29.27	15.79	2.26	89.88	13.30	43.01
100	E32_Db	KnownBoundary	0	281.86	5.67	25.42	0.00	83.87	8.82	27.54
101	E32b_E32b	KnownJunction	0	81.20	0.00	7.54	0.00	0.00	0.00	0.56
102	ER32c	ExonRegion	0	271.17	34.86	13.38	6.37	111.65	18.95	51.22
103	E32_Ab	KnownBoundary	0	64.61	10.32	4.70	1.68	17.80	14.87	14.16
104	ER32d	ExonRegion	0	64.73	11.45	4.83	2.10	15.34	10.57	13.98
105	E32_Dc	KnownBoundary	0	45.41	5.86	4.18	0.00	26.46	2.36	6.39
106	E32_Dd	KnownBoundary	0	0.00	0.00	0.00	0.00	1.18	0.00	0.89
107	E32_De	KnownBoundary	0	34.36	5.83	1.78	1.65	16.34	0.00	6.82
108	ER32e	ExonRegion	0	75.97	11.45	6.77	1.25	39.22	3.68	10.79
109	ER32f	ExonRegion	0	72.34	10.24	6.10	1.25	36.79	2.45	10.60
110	ER32g	ExonRegion	0	65.12	15.48	4.18	1.65	24.68	3.74	12.77
111	ER32h	ExonRegion	0	48.41	25.75	0.14	1.25	23.81	4.66	18.48
112	ER32i	ExonRegion	0	67.84	20.16	3.61	2.60	22.79	4.23	13.10
113	IG45	Intergenic	0	15.57	1.07	0.79	0.11	0.21	0.10	1.78
114	IG45_SR1	SilentIntergenicRegion	0	16.11	1.01	0.80	0.11	0.19	0.11	1.84