Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 C20orf42 Gene 0 21.92 5.94 8.87 1.29 43.18 0.87 417.30 2 339538 Transcript 0 0 0 0 0 0 0 0 3 217289 Transcript 0 24.76 4.77 7.78 0.96 46.35 0.71 318.29 4 378844 Transcript 0 0.00 0.00 0.00 0.00 0.19 0.00 2.55 5 399304 Transcript 0 0.00 0.00 2.41 0.00 1.18 0.00 5.59 6 ER1a ExonRegion 0 1.27 3.07 0.39 0.35 2.81 0.84 51.07 7 E1a_E3a KnownJunction 0 7.28 7.99 2.64 4.96 26.79 3.22 226.82 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.38 0.00 5.09 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E3_Ab NovelBoundary 0 10.05 9.22 2.70 2.47 26.40 0.00 230.85 11 ER3a ExonRegion 0 7.20 9.78 3.10 2.49 25.79 3.29 254.64 12 ER3b ExonRegion 0 21.93 17.54 6.64 2.45 38.34 2.10 422.28 13 E3a_E4a KnownJunction 0 29.41 29.58 5.88 2.25 35.75 3.32 463.12 14 ER4a ExonRegion 0 30.65 12.13 9.61 3.57 55.16 1.98 587.61 15 E4a_E5a KnownJunction 0 36.60 2.42 11.87 4.52 68.56 0.00 563.63 16 ER5a ExonRegion 0 37.79 3.49 9.83 4.10 77.55 1.29 688.04 17 E5_Da KnownBoundary 0 36.12 4.41 9.27 1.68 69.80 1.29 712.01 18 ER5b ExonRegion 0 55.51 5.41 28.83 0.56 61.42 3.52 847.54 19 E5b_E6a KnownJunction 0 27.84 7.59 15.03 0.00 51.25 2.73 737.61 20 E5b_E7a KnownJunction 0 0.00 0.00 2.41 0.00 1.18 0.00 5.59 21 ER6a ExonRegion 0 41.51 9.41 18.81 1.54 66.03 1.30 728.73 22 E6a_E7a KnownJunction 0 31.58 8.67 10.94 1.68 58.58 1.42 547.80 23 ER7a ExonRegion 0 33.56 7.41 10.54 2.38 61.55 1.64 556.83 24 E7a_E8a KnownJunction 0 25.95 5.62 11.01 1.03 54.82 4.37 577.20 25 ER8a ExonRegion 0 37.16 8.46 16.25 1.67 58.29 2.54 613.26 26 E8a_E9a KnownJunction 0 43.99 12.51 13.87 0.00 59.29 0.00 576.55 27 ER9a ExonRegion 0 26.53 7.06 10.64 1.44 49.52 0.71 534.76 28 E9a_E10a KnownJunction 0 22.31 7.20 14.24 1.27 40.39 0.00 437.51 29 ER10a ExonRegion 0 25.50 7.36 13.74 0.00 48.66 0.00 510.90 30 E10a_E11a KnownJunction 0 19.04 2.50 9.14 0.00 57.82 0.00 441.57 31 ER11a ExonRegion 0 24.47 6.44 13.04 2.06 51.91 0.00 581.94 32 E11a_E12a KnownJunction 0 21.60 2.68 13.09 3.74 48.11 0.00 395.85 33 ER12a ExonRegion 0 34.92 2.41 13.18 1.99 67.63 1.74 607.27 34 E12a_E13a KnownJunction 0 42.13 5.23 17.14 0.00 89.56 0.00 685.64 35 ER13a ExonRegion 0 39.98 5.20 13.58 2.78 74.73 0.00 632.39 36 E13a_E14a KnownJunction 0 29.24 6.86 8.48 1.68 53.00 0.00 400.96 37 ER14a ExonRegion 0 25.87 6.88 10.11 1.25 57.41 0.00 400.03 38 ER14b ExonRegion 0 22.35 10.12 10.02 0.08 49.71 0.00 376.58 39 E14b_E15a KnownJunction 0 18.73 6.99 13.06 0.00 58.30 0.00 433.32 40 ER15a ExonRegion 0 30.78 7.85 16.61 0.81 65.94 1.24 510.90 41 E15a_E16a KnownJunction 0 17.74 4.70 13.94 1.27 49.38 1.05 437.09 42 ER16a ExonRegion 0 18.77 5.30 9.22 1.08 47.18 0.44 514.63 43 E16_Ab KnownBoundary 0 13.20 7.20 4.89 0.00 36.38 0.00 361.80 44 ER16b ExonRegion 0 14.03 7.78 6.02 0.00 31.39 0.00 455.22 45 E16_Da KnownBoundary 0 17.67 9.12 6.31 0.00 25.29 0.00 471.39 46 ER16c ExonRegion 0 15.66 5.94 9.26 1.82 41.64 0.67 528.44 47 E16_Db KnownBoundary 1 0.98 0.00 3.66 0.00 10.77 0.00 118.08 48 ER16d ExonRegion 0 24.76 4.77 7.78 0.96 46.35 0.71 318.29 49 IG12_SR2 SilentIntergenicRegion 0 1.63 0.49 1.26 0.27 3.86 0.23 25.04 50 IG12_AR2 ActiveIntergenicRegion 0 0.64 0.29 0.92 0.38 2.92 0.00 14.65